Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, endoplasmic reticulum, vacuole

Predictor Summary:
  • plastid 1
  • extracellular 4
  • golgi 5
  • plasma membrane 4
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 88.18 96.2
Bra014710.1-P Field mustard endoplasmic reticulum, golgi, vacuole 96.52 94.23
AT3G56080.1 Thale cress endoplasmic reticulum, vacuole 79.55 86.07
CDY10370 Canola cytosol 26.06 62.55
VIT_13s0067g01690.t01 Wine grape endoplasmic reticulum, golgi 56.21 61.22
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 53.48 60.45
PGSC0003DMT400077225 Potato plastid 56.97 58.48
Solyc06g051000.2.1 Tomato plastid 56.67 58.26
PGSC0003DMT400069743 Potato endoplasmic reticulum, golgi 54.09 58.24
GSMUA_Achr4P18750_001 Banana endoplasmic reticulum, golgi 51.97 55.14
CDY24913 Canola mitochondrion 52.88 51.93
Os01t0828300-01 Rice golgi, plastid 50.3 49.26
Os05t0472200-01 Rice endoplasmic reticulum, golgi 48.48 49.16
HORVU1Hr1G070430.8 Barley golgi, plasma membrane, vacuole 48.64 48.93
TraesCS1D01G294500.1 Wheat golgi, plasma membrane, plastid 49.24 48.73
TraesCS1B01G305900.1 Wheat mitochondrion 48.48 47.98
TraesCS1A01G297000.1 Wheat golgi 48.18 47.82
Zm00001d043012_P018 Maize golgi 49.85 47.34
Solyc05g052500.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 55.76 47.18
TraesCS3D01G342700.1 Wheat golgi 50.91 46.93
TraesCS3A01G348800.1 Wheat golgi 50.3 46.83
TraesCS3B01G380800.1 Wheat plastid 50.15 46.1
CDY43336 Canola cytosol 13.33 45.83
HORVU3Hr1G088050.14 Barley endoplasmic reticulum, plasma membrane 50.3 44.38
Zm00001d010599_P002 Maize endoplasmic reticulum, plasma membrane, plastid 49.39 43.88
OQU87776 Sorghum endoplasmic reticulum, golgi 44.7 43.57
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 43.03 41.34
CDY33299 Canola nucleus 37.73 41.23
CDY70936 Canola cytosol 11.06 39.89
CDX85977 Canola cytosol 29.09 39.75
CDX84330 Canola endoplasmic reticulum, plasma membrane 42.58 39.41
CDX93797 Canola cytosol 28.48 38.92
CDY50730 Canola cytosol 29.09 38.71
CDY31339 Canola plasma membrane 44.7 38.61
CDX83493 Canola golgi 24.09 38.41
CDY66535 Canola nucleus 37.73 38.02
CDY39830 Canola plasma membrane 44.24 37.82
CDY44314 Canola endoplasmic reticulum 42.58 37.77
CDX94669 Canola endoplasmic reticulum 42.58 37.52
CDX76494 Canola endoplasmic reticulum, golgi 33.18 37.37
CDY12278 Canola endoplasmic reticulum, golgi 33.94 37.33
CDY22567 Canola endoplasmic reticulum, golgi 33.94 37.33
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 43.03 37.27
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 33.18 37.06
CDY66721 Canola golgi 29.7 37.05
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 33.64 36.82
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 33.64 36.82
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 33.64 36.82
CDX99828 Canola golgi 41.82 36.8
CDY70748 Canola cytosol, peroxisome 23.94 36.74
CDY48339 Canola cytosol 41.82 36.51
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 43.48 35.92
CDX70565 Canola endoplasmic reticulum 32.88 35.69
CDX78577 Canola endoplasmic reticulum, golgi 32.73 35.53
CDX94861 Canola endoplasmic reticulum, golgi 32.42 35.49
CDY01971 Canola endoplasmic reticulum, extracellular 22.27 35.34
CDX92981 Canola endoplasmic reticulum, golgi 32.42 35.31
CDX87530 Canola cytosol, golgi, peroxisome, plastid 34.55 35.13
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 34.39 35.03
CDX70263 Canola plastid 31.21 34.8
CDX74837 Canola mitochondrion 36.21 34.69
CDY20475 Canola endoplasmic reticulum, golgi 36.21 34.69
CDX84046 Canola cytosol 32.12 34.64
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 32.12 34.58
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 31.97 34.53
CDY24949 Canola endoplasmic reticulum, plasma membrane 35.3 34.47
CDX99540 Canola cytosol 28.03 34.45
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 32.27 34.35
CDY07639 Canola endoplasmic reticulum 35.15 34.27
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 32.27 34.24
CDY54063 Canola mitochondrion 28.64 34.12
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 43.33 34.05
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 30.76 34.0
CDY57187 Canola cytosol 16.06 33.97
CDX98897 Canola golgi, mitochondrion 35.61 33.91
CDX74348 Canola plastid 30.61 33.84
CDX94256 Canola cytosol 31.67 33.76
CDX86634 Canola endoplasmic reticulum, golgi 31.67 33.71
CDY15505 Canola endoplasmic reticulum, golgi 31.67 33.71
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 31.67 33.71
CDY25257 Canola cytosol 31.67 33.71
CDY44966 Canola cytosol 31.67 33.71
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 33.48 33.64
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 39.09 33.64
CDY07198 Canola mitochondrion 30.45 33.56
CDX89824 Canola endoplasmic reticulum, golgi 31.52 33.55
CDY46435 Canola endoplasmic reticulum, golgi 30.61 33.5
CDX99539 Canola cytosol 31.67 33.44
CDY45006 Canola endoplasmic reticulum, golgi 30.61 33.39
CDY68187 Canola mitochondrion 31.21 33.39
CDY40268 Canola endoplasmic reticulum, golgi 30.61 33.33
CDY67390 Canola mitochondrion 36.36 33.33
CDY26666 Canola mitochondrion 36.06 33.19
CDY16198 Canola endoplasmic reticulum, golgi 30.45 33.17
CDY00911 Canola mitochondrion 29.24 32.99
CDX98606 Canola vacuole 33.18 32.98
CDY08621 Canola mitochondrion, plastid 29.09 32.88
CDY51142 Canola cytosol 30.45 32.58
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 30.76 32.32
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 30.76 32.12
CDY18904 Canola endoplasmic reticulum 30.76 32.07
CDY61681 Canola endoplasmic reticulum, golgi 33.03 31.96
CDX78919 Canola cytosol, golgi 33.48 31.26
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 31.97 29.1
CDX70102 Canola cytosol 35.61 24.97
CDY27362 Canola plasma membrane 30.76 20.12
CDY72237 Canola nucleus 11.36 18.7
CDY33300 Canola plastid 1.21 3.35
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078CH54EnsemblPlants:CDX76062ProteinID:CDX76062
ProteinID:CDX76062.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152
GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00126302001
PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF887InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335
TMHMM:TMhelixUniParc:UPI0004EDBE07SEG:seg:::
Description
BnaA04g03260D
Coordinates
chrLK031806:+:488913..492428
Molecular Weight (calculated)
75375.1 Da
IEP (calculated)
8.972
GRAVY (calculated)
-0.321
Length
660 amino acids
Sequence
(BLAST)
001: MNIFRSRKFS GLCVLSILLV SVTILLLTND TIDLFPYLSL SYLRRSSLSD VPTFTPTSSP APVNNPPPPP EPPVSQTRVD DDDDEPVHQD LEMDWVKDKS
101: SLKVEWKRCE SPDYMPCLDN MKAIKKLKSK RNMEHRERHC PVPAPRCLVP LPKRYKVPLP WPKSRDMIWY DNAPHPKLVD YKKDQNWIRK TGPFFVFPGG
201: GTQFKDGVIH YINYIQKTLP ALEWGKKVRV VLDVGCGVAS FGGTLLDKNV ITMSFAPKDE HEAQIQFALE RGIPATLAVI GTQKLPFPDN AYDVIHCARC
301: RVHWHGYGGR PLLELNRVLR PGGFFVWSAT PVYQHDEGHR NVWKTMESLT TSMCWKVVAR TRFTKVGFVI YQKPDSDSCY GARKNNEPPL CNEEDTKKNS
401: SWYTPLLSCV PKVPVGLTGK WPSQWPGRLT DKPVSLLTEQ RSEESFREDT RLWSGTVSDI YLTGLAINWT KIHNVMDMNA GYGGFAAALI NRPLWVMNVV
501: PVQGEDTLSM IFDRGLIGIY HDWCESFNTY PRSYDLLHSS FLLTNLSQRC DLMEVVVEID RIVRPGGYLV VQDTVEMMKK LNPILLSLRW STNVYKGKFL
601: VGLKSSWRSC ESREGITLQR LSLSPFNPRI HVSKVETSHV GMELVENRYM GLSFRRITLS
Best Arabidopsis Sequence Match ( AT3G56080.1 )
(BLAST)
001: MIKNIFQSRK LSGLCVLSIL LVSVTILLLT NDTIDLFPYL SLPYLPRSSL SVIPTSTPIS SPTNDSSPPL ESPVNQTRVD DHPDDQGLEL DWLKDDKQWN
101: VSLKIDWKRC ESPDYIPCLD NTKAIKKLKS KRNMEHRERH CPERSPKCLV PLPQHYKVPL PWPQSRDMIW YDNVPHPKLV EYKKDQNWVR KSGPFFVFPG
201: GGTQFKDGVI HYINFIQKTL PILDWGKKVR VVLDVGCGVA SFGGTLLDKN VITMSFAPKD EHEAQIQFAL ERGIPATLAV IGTQKLPFPD NAYDVIHCAR
301: CRVHWHGYGG RPLLELNRVL RPGGFFVWSA TPVYQHDEGH RNVWKTMESL TTSMCWKVVA RTRFTKVGFV IYQKPDSDSC YESRKNKDPP LCIEEETKKN
401: SSWYTPLLTC LPKLPVSPIG KWPSGWPERL TETPVSLFRE QRSEESFRED SKLWSGVMSN IYLYSLAINW TRIHNVMDMN AGYGGFAAAL INKPLWVMNV
501: IPVEGEDTLS TIFDRGLIGI YHDWCESFNT YPRSYDLLHS SFLFTNLSQR CDLMEVVVEI DRILRPGGYL AVQDTVEMLK KLNPILLSLR WSTNLYRGKF
601: LVGLKSSWRP
Arabidopsis Description
Probable methyltransferase PMT22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYN3]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.