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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006254.1-P Field mustard endoplasmic reticulum, golgi 98.68 98.68
CDX70565 Canola endoplasmic reticulum 97.7 97.7
AT5G14430.1 Thale cress endoplasmic reticulum 91.61 91.01
Solyc02g067890.2.1 Tomato nucleus 70.39 70.16
PGSC0003DMT400017929 Potato endoplasmic reticulum, golgi 70.23 70.0
TraesCS3A01G475800.1 Wheat cytosol 57.4 69.52
GSMUA_Achr7P20830_001 Banana endoplasmic reticulum, golgi, vacuole 65.13 65.02
Os06t0687450-01 Rice endoplasmic reticulum, golgi 63.98 64.73
TraesCS7A01G444200.1 Wheat plastid 64.47 64.47
TraesCS7D01G433000.1 Wheat plastid 64.64 64.11
HORVU7Hr1G100920.3 Barley plastid 62.66 63.71
TraesCS7B01G342700.1 Wheat plastid 64.14 63.62
CDX94861 Canola endoplasmic reticulum, golgi 60.2 60.7
CDX92981 Canola endoplasmic reticulum, golgi 60.2 60.4
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 59.7 59.22
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 59.38 59.08
CDX89824 Canola endoplasmic reticulum, golgi 60.2 59.03
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 59.7 58.55
CDY15505 Canola endoplasmic reticulum, golgi 59.38 58.23
CDX86634 Canola endoplasmic reticulum, golgi 59.38 58.23
Zm00001d036545_P001 Maize golgi 50.0 55.68
CDX85977 Canola cytosol 34.54 43.48
CDY50730 Canola cytosol 34.7 42.54
CDX93797 Canola cytosol 33.55 42.24
CDX83493 Canola golgi 28.45 41.79
CDY00911 Canola mitochondrion 39.47 41.03
CDY10370 Canola cytosol 18.42 40.73
CDY70936 Canola cytosol 12.17 40.44
CDY43336 Canola cytosol 12.66 40.1
CDY08621 Canola mitochondrion, plastid 38.49 40.07
CDY01971 Canola endoplasmic reticulum, extracellular 27.3 39.9
CDX70263 Canola plastid 38.49 39.53
CDY57187 Canola cytosol 19.9 38.78
CDY70748 Canola cytosol, peroxisome 27.14 38.37
CDX99540 Canola cytosol 33.88 38.36
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 36.35 37.84
CDX84046 Canola cytosol 37.5 37.25
CDX94256 Canola cytosol 37.66 37.0
CDY25257 Canola cytosol 37.66 36.94
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 39.31 36.88
CDY40268 Canola endoplasmic reticulum, golgi 36.68 36.8
CDY44966 Canola cytosol 37.5 36.77
CDX87530 Canola cytosol, golgi, peroxisome, plastid 39.14 36.67
CDX99539 Canola cytosol 37.66 36.64
CDY16198 Canola endoplasmic reticulum, golgi 36.35 36.47
CDY46435 Canola endoplasmic reticulum, golgi 36.02 36.32
CDY18904 Canola endoplasmic reticulum 37.66 36.18
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 37.34 36.15
CDY45006 Canola endoplasmic reticulum, golgi 35.86 36.03
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 37.34 35.92
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 35.2 35.85
CDX74348 Canola plastid 35.03 35.68
CDX76494 Canola endoplasmic reticulum, golgi 34.38 35.67
CDY54063 Canola mitochondrion 32.4 35.56
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 35.2 35.37
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 34.38 35.36
CDY07198 Canola mitochondrion 34.7 35.23
CDY33299 Canola nucleus 34.87 35.1
CDX98897 Canola golgi, mitochondrion 39.97 35.06
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 35.86 35.05
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 35.69 35.0
CDY68187 Canola mitochondrion 35.36 34.85
CDX74837 Canola mitochondrion 39.47 34.83
CDY24949 Canola endoplasmic reticulum, plasma membrane 38.65 34.76
CDY07639 Canola endoplasmic reticulum 38.65 34.71
CDY20475 Canola endoplasmic reticulum, golgi 39.14 34.54
CDY51142 Canola cytosol 35.03 34.52
CDY12278 Canola endoplasmic reticulum, golgi 33.88 34.33
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 34.05 34.33
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 34.05 34.33
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 34.05 34.33
CDY22567 Canola endoplasmic reticulum, golgi 33.55 34.0
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 37.5 33.19
CDY66535 Canola nucleus 35.53 32.98
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 35.53 32.73
CDY24913 Canola mitochondrion 36.02 32.59
CDX84330 Canola endoplasmic reticulum, plasma membrane 38.16 32.54
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 34.87 32.27
CDX98606 Canola vacuole 35.2 32.23
CDY44314 Canola endoplasmic reticulum 38.49 31.45
CDX94669 Canola endoplasmic reticulum 38.32 31.11
CDY61681 Canola endoplasmic reticulum, golgi 34.7 30.94
CDX99828 Canola golgi 37.83 30.67
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 37.99 30.32
CDY48339 Canola cytosol 37.66 30.29
CDY31339 Canola plasma membrane 37.83 30.1
CDX78919 Canola cytosol, golgi 34.87 29.99
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 35.53 29.79
CDY39830 Canola plasma membrane 37.66 29.66
CDY66721 Canola golgi 25.33 29.11
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.17 28.29
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 35.53 28.16
CDY26666 Canola mitochondrion 31.74 26.92
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.17 26.9
CDY67390 Canola mitochondrion 31.74 26.81
CDX70102 Canola cytosol 40.13 25.93
CDY27362 Canola plasma membrane 37.5 22.6
CDY72237 Canola nucleus 9.87 14.96
CDY33300 Canola plastid 0.49 1.26
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078CPD1EnsemblPlants:CDX78577ProteinID:CDX78577
ProteinID:CDX78577.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00129987001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF692InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EE8301SEG:seg:
Description
BnaA03g04890D
Coordinates
chrLK031815:+:1369014..1372363
Molecular Weight (calculated)
69272.4 Da
IEP (calculated)
8.787
GRAVY (calculated)
-0.390
Length
608 amino acids
Sequence
(BLAST)
001: MKPSRSERVR ATPPKLFTYV LVGFIALLGL TCLYYGSSFA PGSRKSDEFD GSSPARAGFA SNRDGESRVE VPRSIPICDS KHSDLIPCLD RDLYHQLKLR
101: LNLSLMEHYE HHCPPPERRF NCRVPPPAGY KIPLKWPVSR DEVWKANIPH THLAQEKSDQ NWMVVNGDKI NFPGGGTHFH YGADKYIVSL AQMLKFPGDK
201: LNNGGSIRNV LDIGCGVASF GAYLLSHDII AMSLAPNDVH QNQIQFALER GIPSTLGVLG TKRLPYPSRS FELAHCSRCR IDWLQRDGIL LLELDRLLRP
301: GGYFVYSSPE AYAHDPENRK IGTAMHDLFR RMCWRVVAKR DQSVIWGKPI SNSCYLKRGS GVQPPLCPSG DDPDATWNVS MKACITPYSV RMHKERWSGL
401: VPWPRRLTAP PPRLEEIGVT PEQFREDTET WRHRVMEYWK LLKPMVQKNS IRNVMDMSSN LGGFAAALND KDVWVMNVIP VQSQPRMKII YDRGLIGATH
501: DWCEAFDTYP RTFDLIHAWN TFTETEARGC SIEDLLIEMD RILRPEGFVI IRDTSENISY IKKYLTLLKW DKWMTETTPK GDSLSAAKDE RVLIARKKLW
601: SVAAISEL
Best Arabidopsis Sequence Match ( AT5G14430.1 )
(BLAST)
001: MKHFRTERVR ATPKLFTYVL VGFIALLGLT CLYYGSSFAP GSRKSDEFDG SNNRVRTGIG SLRNRDIVLA VSRFEVPKSV PICDSRHSEL IPCLDRNLHY
101: QLKLKLNLSL MEHYEHHCPP SERRFNCLVP PPVGYKIPLR WPVSRDEVWK ANIPHTHLAQ EKSDQNWMVV NGDKINFPGG GTHFHNGADK YIVSLAQMLK
201: FPGDKLNNGG SIRNVLDVGC GVASFGAYLL SHDIIAMSLA PNDVHQNQIQ FALERGIPST LGVLGTKRLP YPSRSFELAH CSRCRIDWLQ RDGILLLELD
301: RLLRPGGYFV YSSPEAYAHD PENRKIGNAM HDLFKRMCWK VVAKRDQSVI WGKPISNSCY LKRDPGVLPP LCPSGDDPDA TWNVSMKACI SPYSVRMHKE
401: RWSGLVPWPR RLTAPPPRLE EIGVTPEQFR EDTETWRLRV IEYWKLLKPM VQKNSIRNVM DMSSNLGGFA AALNDKDVWV MNVMPVQSSP RMKIIYDRGL
501: IGATHDWCEA FDTYPRTFDL IHAWNTFTET QARGCSFEDL LIEMDRILRP EGFVIIRDTT DNISYIKKYL TLLKWDKWST ETTPKGDPLS TKDEIVLIAR
601: KKLWSLPAIS VS
Arabidopsis Description
Probable methyltransferase PMT9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZV7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.