Factsheet for Bra006254.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 3
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78577	Canola	endoplasmic reticulum, golgi	98.68	98.68
CDX70565	Canola	endoplasmic reticulum	98.03	98.03
AT5G14430.1	Thale cress	endoplasmic reticulum	91.61	91.01
Solyc02g067890.2.1	Tomato	nucleus	70.72	70.49
PGSC0003DMT400017929	Potato	endoplasmic reticulum, golgi	70.56	70.33
TraesCS3A01G475800.1	Wheat	cytosol	57.57	69.72
GSMUA_Achr7P20830_001	Banana	endoplasmic reticulum, golgi, vacuole	65.46	65.35
Os06t0687450-01	Rice	endoplasmic reticulum, golgi	64.14	64.89
TraesCS7A01G444200.1	Wheat	plastid	64.64	64.64
TraesCS7D01G433000.1	Wheat	plastid	64.8	64.27
HORVU7Hr1G100920.3	Barley	plastid	62.83	63.88
TraesCS7B01G342700.1	Wheat	plastid	64.31	63.78
Bra001909.1-P	Field mustard	endoplasmic reticulum, golgi	60.53	60.73
Bra015316.1-P	Field mustard	endoplasmic reticulum, golgi	60.53	59.07
Bra014936.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	59.54	59.05
Bra030570.1-P	Field mustard	endoplasmic reticulum, golgi	59.54	58.39
Zm00001d036545_P001	Maize	golgi	50.0	55.68
Bra029822.1-P	Field mustard	mitochondrion, plastid	38.65	40.24
Bra009489.1-P	Field mustard	plastid	38.49	39.59
Bra000296.1-P	Field mustard	plastid	35.69	39.53
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	36.51	38.01
Bra037916.1-P	Field mustard	cytosol	37.83	36.8
Bra033172.1-P	Field mustard	cytosol	37.5	36.77
Bra012437.1-P	Field mustard	endoplasmic reticulum, golgi	36.84	36.48
Bra024678.1-P	Field mustard	endoplasmic reticulum, golgi	36.51	36.16
Bra015681.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	38.49	36.11
Bra016293.1-P	Field mustard	endoplasmic reticulum, golgi	36.18	36.01
Bra000959.1-P	Field mustard	plastid	35.2	35.85
Bra004933.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	37.17	35.76
Bra041005.1-P	Field mustard	cytosol	37.5	35.74
Bra012557.1-P	Field mustard	cytosol, golgi, nucleus	35.2	35.61
Bra035476.1-P	Field mustard	cytosol	37.5	35.57
Bra039319.1-P	Field mustard	golgi	36.84	35.44
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	35.86	35.16
Bra008529.1-P	Field mustard	mitochondrion	35.86	35.1
Bra020975.1-P	Field mustard	endoplasmic reticulum, golgi	34.21	34.9
Bra000145.1-P	Field mustard	endoplasmic reticulum	38.82	34.81
Bra005018.1-P	Field mustard	mitochondrion	39.64	34.73
Bra023213.1-P	Field mustard	endoplasmic reticulum, golgi	33.88	34.33
Bra010830.1-P	Field mustard	golgi	37.99	33.87
Bra033872.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	33.55	33.83
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	35.53	31.95
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	38.82	31.47
Bra037356.1-P	Field mustard	mitochondrion	35.03	30.78
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	38.49	30.71
Bra032319.1-P	Field mustard	cytosol	37.66	30.41
Bra017538.1-P	Field mustard	golgi, plasma membrane	35.69	30.01
Bra013374.1-P	Field mustard	cytosol, golgi	34.87	29.99
Bra025737.1-P	Field mustard	mitochondrion	31.58	26.67
Bra038881.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid, vacuole	38.65	26.05
Bra009158.1-P	Field mustard	cytosol	39.8	25.37
Bra036837.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid, vacuole	36.35	24.18
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	36.18	23.55
Bra031938.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	5.59	11.41

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	EnsemblPlantsGene:Bra006254	EnsemblPlants:Bra006254.1	EnsemblPlants:Bra006254.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005773	GO:GO:0005774	GO:GO:0005794	GO:GO:0005802	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0030312	GO:GO:0032259	UniProt:M4CPW5	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF692
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI000253FB4D	SEG:seg

Description

AT5G14430 (E=0.0) | dehydration-responsive protein-related

Coordinates

chrA03:+:2707162..2710142

Molecular Weight (calculated)

69227.4 Da

IEP (calculated)

8.603

GRAVY (calculated)

-0.367

Length

608 amino acids

Sequence
(BLAST)

001: MKPSRSERVR ATPPKLFTYV LVGFIALLGL TCLYYGSSFA PGSRKSDEFD GSSPARAGFA SNRDGESRVE VPRSIPICDS KHSDLIPCLD RDLYHQLKLR
101: LNLTLMEHYE HHCPPPERRF NCLVPPPAGY MIPIKWPVSR DEVWKANIPH THLAQEKSDQ NWMVVNGDKI NFPGGGTHFH YGADKYIVSL AQMLKFPGDK
201: LNNGGSIRNV LDVGCGVASF GAYLLSHDII AMSLAPNDVH QNQIQFALER GIPSTLGVLG TKRLPYPSRS FELAHCSRCR IDWLQRDGIL LLELDRLLRP
301: GGYFVYSSPE AYAHDPENRK IGTAMHDLFR RMCWRVVAKR DQSVIWGKPI SNSCYLKRGP GVQPPLCPSG DDPDATWNVS MKACITPYSV RMHKERWSGL
401: VPWPRRLTAP PPRLEEIGVT PEQFREDTET WRHRVMEYWK LLKPMVQKNS IRNVMDMSSN LGGFAAALND KDVWVMNVIP VQSQPRMKII YDRGLIGATH
501: DWCEAFDTYP RTFDLIHAWN TFTETQARGC SIEDLLIEMD RILRPEGFVI IRDTSENISY IKKYLTLLKW DKWMTETTPN GDSLSAAKDE RVLIARKKLW
601: SVAAISEL

Best Arabidopsis Sequence Match ( AT5G14430.1 )
(BLAST)

001: MKHFRTERVR ATPKLFTYVL VGFIALLGLT CLYYGSSFAP GSRKSDEFDG SNNRVRTGIG SLRNRDIVLA VSRFEVPKSV PICDSRHSEL IPCLDRNLHY
101: QLKLKLNLSL MEHYEHHCPP SERRFNCLVP PPVGYKIPLR WPVSRDEVWK ANIPHTHLAQ EKSDQNWMVV NGDKINFPGG GTHFHNGADK YIVSLAQMLK
201: FPGDKLNNGG SIRNVLDVGC GVASFGAYLL SHDIIAMSLA PNDVHQNQIQ FALERGIPST LGVLGTKRLP YPSRSFELAH CSRCRIDWLQ RDGILLLELD
301: RLLRPGGYFV YSSPEAYAHD PENRKIGNAM HDLFKRMCWK VVAKRDQSVI WGKPISNSCY LKRDPGVLPP LCPSGDDPDA TWNVSMKACI SPYSVRMHKE
401: RWSGLVPWPR RLTAPPPRLE EIGVTPEQFR EDTETWRLRV IEYWKLLKPM VQKNSIRNVM DMSSNLGGFA AALNDKDVWV MNVMPVQSSP RMKIIYDRGL
501: IGATHDWCEA FDTYPRTFDL IHAWNTFTET QARGCSFEDL LIEMDRILRP EGFVIIRDTT DNISYIKKYL TLLKWDKWST ETTPKGDPLS TKDEIVLIAR
601: KKLWSLPAIS VS

Arabidopsis Description

Probable methyltransferase PMT9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZV7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.