Factsheet for Bra015316.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 3
mitochondrion 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04430.1	Bra002403.1-P	AT5G22290.1	21798944
AT1G04430.1	Bra006619.1-P	AT5G22290.1	21798944
AT1G04430.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89824	Canola	endoplasmic reticulum, golgi	99.36	99.84
Bra030570.1-P	Field mustard	endoplasmic reticulum, golgi	94.54	95.0
AT1G04430.1	Thale cress	endoplasmic reticulum, golgi	91.97	91.97
Bra001909.1-P	Field mustard	endoplasmic reticulum, golgi	77.21	79.37
Bra014936.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	77.37	78.63
GSMUA_Achr1P20520_001	Banana	endoplasmic reticulum, golgi, vacuole	74.48	74.72
GSMUA_Achr6P36560_001	Banana	endoplasmic reticulum, golgi, vacuole	74.32	74.68
GSMUA_Achr5P21350_001	Banana	endoplasmic reticulum	72.39	72.62
Zm00001d032703_P006	Maize	endoplasmic reticulum, golgi, vacuole	70.79	72.41
Os10t0477100-01	Rice	golgi	70.79	71.47
OQU91634	Sorghum	endoplasmic reticulum, golgi	70.63	71.43
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	70.63	71.43
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	70.63	71.43
TraesCS1A01G154400.2	Wheat	golgi	69.02	68.36
Zm00001d014036_P002	Maize	endoplasmic reticulum	70.63	67.28
Bra006254.1-P	Field mustard	endoplasmic reticulum, golgi	59.07	60.53
Bra009489.1-P	Field mustard	plastid	38.68	40.78
Bra029822.1-P	Field mustard	mitochondrion, plastid	37.72	40.24
Bra000296.1-P	Field mustard	plastid	35.31	40.07
Bra015681.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	40.13	38.58
Bra039319.1-P	Field mustard	golgi	37.88	37.34
Bra000145.1-P	Field mustard	endoplasmic reticulum	40.61	37.32
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	34.83	37.16
Bra004933.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	37.56	37.03
Bra012437.1-P	Field mustard	endoplasmic reticulum, golgi	36.44	36.97
Bra033172.1-P	Field mustard	cytosol	36.44	36.61
Bra008529.1-P	Field mustard	mitochondrion	36.44	36.55
Bra024678.1-P	Field mustard	endoplasmic reticulum, golgi	35.96	36.48
Bra016293.1-P	Field mustard	endoplasmic reticulum, golgi	35.63	36.33
Bra010830.1-P	Field mustard	golgi	39.49	36.07
Bra005018.1-P	Field mustard	mitochondrion	40.13	36.02
Bra037916.1-P	Field mustard	cytosol	35.96	35.84
Bra012557.1-P	Field mustard	cytosol, golgi, nucleus	34.35	35.61
Bra035476.1-P	Field mustard	cytosol	36.44	35.41
Bra000959.1-P	Field mustard	plastid	33.71	35.18
Bra041005.1-P	Field mustard	cytosol	35.96	35.11
Bra020975.1-P	Field mustard	endoplasmic reticulum, golgi	33.55	35.07
Bra023213.1-P	Field mustard	endoplasmic reticulum, golgi	33.71	35.0
Bra033872.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	33.23	34.33
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	33.87	34.03
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	39.65	32.93
Bra032319.1-P	Field mustard	cytosol	39.65	32.8
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	38.2	31.23
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	33.23	30.62
Bra013374.1-P	Field mustard	cytosol, golgi	34.19	30.13
Bra037356.1-P	Field mustard	mitochondrion	32.91	29.62
Bra017538.1-P	Field mustard	golgi, plasma membrane	34.19	29.46
Bra038881.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid, vacuole	39.0	26.94
Bra025737.1-P	Field mustard	mitochondrion	30.98	26.81
Bra009158.1-P	Field mustard	cytosol	39.81	26.0
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	38.2	25.48
Bra036837.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid, vacuole	35.79	24.4
Bra031938.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	6.9	14.43

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	EnsemblPlantsGene:Bra015316	EnsemblPlants:Bra015316.1	EnsemblPlants:Bra015316.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	UniProt:M4DFP3	PFAM:PF03141	PANTHER:PTHR10108
PANTHER:PTHR10108:SF704	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI000254408C
SEG:seg	:	:	:	:	:

Description

AT1G04430 (E=0.0) | dehydration-responsive protein-related

Coordinates

chrA10:-:2510899..2514021

Molecular Weight (calculated)

70439.6 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.452

Length

623 amino acids

Sequence
(BLAST)

001: MRGRSDGGQK KRLIASLCAV ALLLCFVYMY YGSSNQGASA EYGRSLRKLG SSYLGGDDDN DNGDNKQDGS VTSEEDSLAV AKSFPVCDDR HSEIIPCLDR
101: NFIYQSRLKL DLSLMEHYER HCPPPERKFN CLIPPPSGYK VPIKWPKSRD EVWQANIPHT HLAKEKSDQN WMVVKGDKIN FPGGGTHFHY GADKYIASIA
201: NMLNFSNDVL NDEGRLRTVL DVGCGVASFG AYLLSSDIIA MSLAPNDVHQ NQIQFALERG IPAYLGVLGT KRLPYPSRSF ELAHCSRCRI DWLQRDGILL
301: LELDRVLRPG GYFAYSSPEA YAQDEEDLRI WKEMSALVER MCWRIAAKRN QTVVWQKPLS NDCYLEREPG TQPPLCRSDA DPDAVYGVSM EACITPYSKH
401: DHKTKGSGLA PWPARMTSPP PRLADFGYST HMFEKDTELW KQQVDSYWNL MSSKVKANTV RNIMDMKAHM GSFAAALRDK DVWVMNVVSP DGPNTLKLIY
501: DRGLIGTNHN WCEAFSTYPR TYDLLHAWTV FSDIRSKGCS AEDLLIEMDR ILRPTGFVII RDKESVVESI KKYMKALHWE VVASEKVTTG SELDQESEDG
601: ESNVVFIAQK KLWLTSESLR DTE

Best Arabidopsis Sequence Match ( AT1G04430.2 )
(BLAST)

001: MMRGRSDGGL KKRLIASVCV VALFVCFLFM YYGSSSQGAS ALEYGRSLRK LGSSYLSGDD DNGDTKQDDS VANAEDSLVV AKSFPVCDDR HSEIIPCLDR
101: NFIYQMRLKL DLSLMEHYER HCPPPERRFN CLIPPPSGYK VPIKWPKSRD EVWKANIPHT HLAKEKSDQN WMVEKGEKIS FPGGGTHFHY GADKYIASIA
201: NMLNFSNDVL NDEGRLRTVL DVGCGVASFG AYLLASDIMT MSLAPNDVHQ NQIQFALERG IPAYLGVLGT KRLPYPSRSF EFAHCSRCRI DWLQRDGLLL
301: LELDRVLRPG GYFAYSSPEA YAQDEENLKI WKEMSALVER MCWRIAVKRN QTVVWQKPLS NDCYLEREPG TQPPLCRSDA DPDAVAGVSM EACITPYSKH
401: DHKTKGSGLA PWPARLTSSP PRLADFGYST DMFEKDTELW KQQVDSYWNL MSSKVKSNTV RNIMDMKAHM GSFAAALKDK DVWVMNVVSP DGPNTLKLIY
501: DRGLIGTNHN WCEAFSTYPR TYDLLHAWSI FSDIKSKGCS AEDLLIEMDR ILRPTGFVII RDKQSVVESI KKYLQALHWE TVASEKVNTS SELDQDSEDG
601: ENNVVFIVQK KLWLTSESLR DSE

Arabidopsis Description

Probable methyltransferase PMT8 [Source:UniProtKB/Swiss-Prot;Acc:Q940J9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.