Factsheet for Bra009158.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70102	Canola	cytosol	93.82	95.11
AT5G06050.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	62.16	86.95
GSMUA_Achr5P28990_001	Banana	cytosol	39.83	68.22
Bra000145.1-P	Field mustard	endoplasmic reticulum	48.43	68.14
VIT_13s0019g02250.t01	Wine grape	golgi	48.85	67.93
PGSC0003DMT400069783	Potato	endoplasmic reticulum	48.22	67.85
KRG97843	Soybean	endoplasmic reticulum	47.06	67.72
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	47.59	66.96
KRH31030	Soybean	endoplasmic reticulum, plasma membrane	46.96	66.87
GSMUA_Achr9P03780_001	Banana	cytosol	38.99	66.19
KRH15065	Soybean	nucleus	45.81	65.81
KRH73069	Soybean	endoplasmic reticulum	45.39	65.81
Bra005018.1-P	Field mustard	mitochondrion	47.06	64.7
EES03874	Sorghum	mitochondrion	44.44	61.63
Zm00001d012400_P007	Maize	plasma membrane	41.82	61.57
Os01t0846600-01	Rice	mitochondrion	44.34	61.57
Bra015681.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	41.51	61.11
TraesCS3D01G356400.1	Wheat	endoplasmic reticulum	44.03	60.17
Zm00001d042883_P001	Maize	mitochondrion, plastid	43.71	60.0
TraesCS3A01G362600.1	Wheat	golgi	44.03	59.83
TraesCS3B01G395100.1	Wheat	plastid	44.23	59.69
HORVU3Hr1G085900.1	Barley	golgi, plastid	44.23	56.42
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	24.84	40.58
Bra000296.1-P	Field mustard	plastid	23.27	40.44
Bra001909.1-P	Field mustard	endoplasmic reticulum, golgi	25.58	40.26
Bra030570.1-P	Field mustard	endoplasmic reticulum, golgi	26.0	40.0
Bra015316.1-P	Field mustard	endoplasmic reticulum, golgi	26.0	39.81
Bra006254.1-P	Field mustard	endoplasmic reticulum, golgi	25.37	39.8
Bra014936.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	25.26	39.31
Bra012437.1-P	Field mustard	endoplasmic reticulum, golgi	24.42	37.95
Bra009489.1-P	Field mustard	plastid	23.48	37.9
Bra016293.1-P	Field mustard	endoplasmic reticulum, golgi	24.0	37.48
Bra024678.1-P	Field mustard	endoplasmic reticulum, golgi	24.11	37.46
Bra010830.1-P	Field mustard	golgi	26.73	37.39
Bra039319.1-P	Field mustard	golgi	24.53	37.03
Bra000959.1-P	Field mustard	plastid	23.17	37.02
Bra033172.1-P	Field mustard	cytosol	23.69	36.45
Bra004933.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	24.11	36.39
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	23.48	36.13
Bra037916.1-P	Field mustard	cytosol	23.58	36.0
Bra029822.1-P	Field mustard	mitochondrion, plastid	22.01	35.96
Bra012557.1-P	Field mustard	cytosol, golgi, nucleus	22.64	35.94
Bra008529.1-P	Field mustard	mitochondrion	23.38	35.91
Bra020975.1-P	Field mustard	endoplasmic reticulum, golgi	22.43	35.91
Bra023213.1-P	Field mustard	endoplasmic reticulum, golgi	22.54	35.83
Bra041005.1-P	Field mustard	cytosol	23.9	35.74
Bra035476.1-P	Field mustard	cytosol	23.79	35.41
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	27.25	34.67
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	27.67	34.65
Bra033872.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	21.7	34.33
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	24.11	34.02
Bra032319.1-P	Field mustard	cytosol	26.83	34.0
Bra037356.1-P	Field mustard	mitochondrion	22.64	31.21
Bra017538.1-P	Field mustard	golgi, plasma membrane	23.48	30.98
Bra013374.1-P	Field mustard	cytosol, golgi	22.75	30.69
Bra025737.1-P	Field mustard	mitochondrion	23.06	30.56
Bra038881.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid, vacuole	27.57	29.16
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	27.15	27.73
Bra036837.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid, vacuole	25.79	26.91
Bra031938.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	5.66	18.12

Protein Annotations

MapMan:17.4.1.3.7	Gene3D:3.30.70.330	Gene3D:3.40.50.150	EnsemblPlantsGene:Bra009158	EnsemblPlants:Bra009158.1	EnsemblPlants:Bra009158.1-P
GO:GO:0001731	GO:GO:0001732	GO:GO:0002183	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003743	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005852	GO:GO:0006412	GO:GO:0006413	GO:GO:0006446	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0016282	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	GO:GO:0033290	InterPro:IPR000504
InterPro:IPR012677	UniProt:M4CY61	HAMAP:MF_03006	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFAM:PF03141
PFAM:PF12353	PFscan:PS50102	PANTHER:PTHR10108	PANTHER:PTHR10108:SF789	InterPro:Put_SAM_MeTrfase	InterPro:RBD_domain_sf
InterPro:RRM_dom	InterPro:SAM-dependent_MTases	SMART:SM00360	SUPFAM:SSF53335	SUPFAM:SSF54928	UniParc:UPI0002544E1F
InterPro:eIF3G_RRM	InterPro:eIF3_g	InterPro:eIF3g_N	SEG:seg	:	:

Description

AT5G06050 (E=0.0) | dehydration-responsive protein-related

Coordinates

chrA10:+:15461609..15466652

Molecular Weight (calculated)

108509.0 Da

IEP (calculated)

6.078

GRAVY (calculated)

-0.433

Length

954 amino acids

Sequence
(BLAST)

001: MASMMQRTSN FQWGDIEEDD DDLDILLPQV IGPDENGVKK VIEYRLNDEG RRIKVTTTTR VQKRLLSQRA AERRSWPKFG DAAREEPGLY LTVRSTEDIH
101: LERGSQAEEA TTSGDSMPQA GGVLMVCRVC RMRGDHWTAR CPQRDLLSLM ETPLTTTEAS TSTEVYVPPS MRAGADMRRR NDENSVRVTN LSEDTREQDL
201: MELFHPFGAV TRAYVAVDKN TNMSRGFGFV NFVSREDAER DINTLNGYGY DNLILRVEWA TPRPRGNLLR SSSFFKISIF VLISVACFFL GKHWSDDGFR
301: RLVFFSSEPS RSPIVALSPD LGKTYNISDL IHKSHPIPPV PLTPPPPPST VDLHVFGIVD ENGTMSDEFQ VGDYDAESLG NQTESESGDG EAELTTVRAS
401: VGRIEICPEV MTDYIPCLDN EEAIKRLDST VRGERFERHC PEEGTGLNCT VPVPNGYRPP IPWPKSREEV WFNNVPHTRL VEDKGGQNWI SKENDKFKFP
501: GGGTQFIHGA DQYLDQISQM VSDISFGNHT RVVLDIGCGV ASFGAYLMSR DVLTLSIAPK DVHENQIQFA LERGVPAMVA AFTTRRLLYP SQAFDLVHCS
601: RCRINWTRDD FMYCHVMLNE DGILLLEVNR MLRAGGYFVW AAQPVYKHEK ALEEQWEEML NVTTRLCWVL VKKEGYIAIW QKPTNNTCYL SRDAGIMPPL
701: CNPEDDPDSV WYVDLKACIT RIEDNGYGAN LAPWPSRLQT PPDRLQTIQI DSYIARKELF MAEYKYWKEI ISNYVNALHW KQIGLRNVMD MRAGFGGFAA
801: ALAELKVDCW VLNVVPVSGP NTLPVIYDRG LLGVMHDWCE PFDTYPRTYD LLHAAGLFSI ERKRCNMTTI MLEMDRILRP GGRVYIRDTI NVMSELQEIG
901: NAMRWHTTLR ETAEGPHASY RVLLCEKKFE NKVESSVDKH PAKKKRRKSK GKRH

Best Arabidopsis Sequence Match ( AT5G06050.1 )
(BLAST)

001: MKLFLNSNLL RNSIFFKISA FVLISVACFF LGKHWSEDGF RRLIFFSAEP SRSPIVALSP DFGKTYNISG LIYESHPILP PSLSPPPPPD SVELKVFGIV
101: NENGTMSDEF QIGDYDVESA ETLGNQTEFE SSDDDDIKST TARVSVRKFE ICSENMTEYI PCLDNVEAIK RLNSTARGER FERNCPNDGM GLNCTVPIPQ
201: GYRSPIPWPR SRDEVWFNNV PHTKLVEDKG GQNWIYKEND KFKFPGGGTQ FIHGADQYLD QISQMIPDIS FGNHTRVVLD IGCGVASFGA YLMSRNVLTM
301: SIAPKDVHEN QIQFALERGV PAMVAAFTTR RLLYPSQAFD LVHCSRCRIN WTRDDGILLL EVNRMLRAGG YFVWAAQPVY KHEKALEEQW EEMLNLTTRL
401: CWVLVKKEGY IAIWQKPVNN TCYLSRGAGV SPPLCNSEDD PDNVWYVDLK ACITRIEENG YGANLAPWPA RLLTPPDRLQ TIQIDSYIAR KELFVAESKY
501: WKEIISNYVN ALHWKQIGLR NVLDMRAGFG GFAAALAELK VDCWVLNVIP VSGPNTLPVI YDRGLLGVMH DWCEPFDTYP RTYDLLHAAG LFSIERKRCN
601: MTTMMLEMDR ILRPGGRVYI RDTINVTSEL QEIGNAMRWH TSLRETAEGP HSSYRVLLCE KRFESSEKRR TKKRRKTKGK RA

Arabidopsis Description

Probable methyltransferase PMT12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG39]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.