Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 3
- mitochondrion 2
- vacuole 2
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98897 | Canola | golgi, mitochondrion | 87.1 | 85.71 |
| GSMUA_Achr5P28990_001 | Banana | cytosol | 55.57 | 68.04 |
| VIT_13s0019g02250.t01 | Wine grape | golgi | 68.33 | 67.93 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 68.62 | 67.44 |
| KRH73069 | Soybean | endoplasmic reticulum | 64.81 | 67.17 |
| KRG97843 | Soybean | endoplasmic reticulum | 65.25 | 67.12 |
| KRH15065 | Soybean | nucleus | 64.96 | 66.72 |
| KRH31030 | Soybean | endoplasmic reticulum, plasma membrane | 65.1 | 66.27 |
| PGSC0003DMT400069783 | Potato | endoplasmic reticulum | 65.69 | 66.08 |
| GSMUA_Achr9P03780_001 | Banana | cytosol | 54.4 | 66.01 |
| Solyc05g052970.2.1 | Tomato | endoplasmic reticulum | 64.96 | 65.34 |
| CDX70102 | Canola | cytosol | 87.24 | 63.23 |
| Bra009158.1-P | Field mustard | cytosol | 86.95 | 62.16 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 58.94 | 61.37 |
| Zm00001d012400_P007 | Maize | plasma membrane | 57.62 | 60.65 |
| EES03874 | Sorghum | mitochondrion | 61.14 | 60.61 |
| Os01t0846600-01 | Rice | mitochondrion | 60.56 | 60.12 |
| TraesCS3D01G356400.1 | Wheat | endoplasmic reticulum | 60.41 | 59.03 |
| Zm00001d042883_P001 | Maize | mitochondrion, plastid | 60.12 | 58.99 |
| TraesCS3A01G362600.1 | Wheat | golgi | 60.41 | 58.69 |
| TraesCS3B01G395100.1 | Wheat | plastid | 60.7 | 58.56 |
| HORVU3Hr1G085900.1 | Barley | golgi, plastid | 60.41 | 55.08 |
| AT4G14360.2 | Thale cress | endoplasmic reticulum, golgi | 36.66 | 41.12 |
| AT3G23300.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 36.22 | 40.43 |
| AT1G04430.1 | Thale cress | endoplasmic reticulum, golgi | 36.51 | 39.97 |
| AT5G14430.1 | Thale cress | endoplasmic reticulum | 35.63 | 39.71 |
| AT2G40280.1 | Thale cress | extracellular, plasma membrane | 34.16 | 39.56 |
| AT3G56080.1 | Thale cress | endoplasmic reticulum, vacuole | 34.9 | 39.02 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 33.87 | 37.5 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 32.55 | 37.0 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 34.16 | 36.93 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 32.99 | 36.82 |
| AT1G33170.1 | Thale cress | cytosol | 34.31 | 36.62 |
| AT4G00750.1 | Thale cress | mitochondrion | 33.58 | 36.18 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 31.82 | 36.17 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 33.28 | 35.86 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 32.55 | 35.75 |
| AT4G00740.1 | Thale cress | golgi | 31.23 | 35.5 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 30.21 | 34.16 |
| AT2G34300.3 | Thale cress | endoplasmic reticulum, golgi, vacuole | 38.56 | 34.16 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 29.91 | 34.06 |
| AT1G29470.1 | Thale cress | golgi | 37.54 | 33.25 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 37.83 | 31.12 |
| AT1G19430.1 | Thale cress | mitochondrion | 31.23 | 29.42 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 37.83 | 28.83 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:830492 | UniProt:A0A178UGZ5 | ProteinID:AED90959.1 | EMBL:AK226215 |
| ArrayExpress:AT5G06050 | EnsemblPlantsGene:AT5G06050 | RefSeq:AT5G06050 | TAIR:AT5G06050 | RefSeq:AT5G06050-TAIR-G | EnsemblPlants:AT5G06050.1 |
| TAIR:AT5G06050.1 | Unigene:At.32910 | ProteinID:BAB10206.1 | EMBL:BT015368 | EMBL:BT020595 | GO:GO:0000139 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 | RefSeq:NP_196224.1 | ProteinID:OAO93063.1 | PFAM:PF03141 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PFscan:PS51257 | PANTHER:PTHR10108 | PANTHER:PTHR10108:SF789 | InterPro:Put_SAM_MeTrfase | UniProt:Q9FG39 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | TMHMM:TMhelix | UniParc:UPI000009E67B | SEG:seg | : | : |
Description
Probable methyltransferase PMT12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG39]
Coordinates
chr5:+:1820117..1823862
Molecular Weight (calculated)
77715.1 Da
IEP (calculated)
7.262
GRAVY (calculated)
-0.319
Length
682 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLFLNSNLL RNSIFFKISA FVLISVACFF LGKHWSEDGF RRLIFFSAEP SRSPIVALSP DFGKTYNISG LIYESHPILP PSLSPPPPPD SVELKVFGIV
101: NENGTMSDEF QIGDYDVESA ETLGNQTEFE SSDDDDIKST TARVSVRKFE ICSENMTEYI PCLDNVEAIK RLNSTARGER FERNCPNDGM GLNCTVPIPQ
201: GYRSPIPWPR SRDEVWFNNV PHTKLVEDKG GQNWIYKEND KFKFPGGGTQ FIHGADQYLD QISQMIPDIS FGNHTRVVLD IGCGVASFGA YLMSRNVLTM
301: SIAPKDVHEN QIQFALERGV PAMVAAFTTR RLLYPSQAFD LVHCSRCRIN WTRDDGILLL EVNRMLRAGG YFVWAAQPVY KHEKALEEQW EEMLNLTTRL
401: CWVLVKKEGY IAIWQKPVNN TCYLSRGAGV SPPLCNSEDD PDNVWYVDLK ACITRIEENG YGANLAPWPA RLLTPPDRLQ TIQIDSYIAR KELFVAESKY
501: WKEIISNYVN ALHWKQIGLR NVLDMRAGFG GFAAALAELK VDCWVLNVIP VSGPNTLPVI YDRGLLGVMH DWCEPFDTYP RTYDLLHAAG LFSIERKRCN
601: MTTMMLEMDR ILRPGGRVYI RDTINVTSEL QEIGNAMRWH TSLRETAEGP HSSYRVLLCE KRFESSEKRR TKKRRKTKGK RA
101: NENGTMSDEF QIGDYDVESA ETLGNQTEFE SSDDDDIKST TARVSVRKFE ICSENMTEYI PCLDNVEAIK RLNSTARGER FERNCPNDGM GLNCTVPIPQ
201: GYRSPIPWPR SRDEVWFNNV PHTKLVEDKG GQNWIYKEND KFKFPGGGTQ FIHGADQYLD QISQMIPDIS FGNHTRVVLD IGCGVASFGA YLMSRNVLTM
301: SIAPKDVHEN QIQFALERGV PAMVAAFTTR RLLYPSQAFD LVHCSRCRIN WTRDDGILLL EVNRMLRAGG YFVWAAQPVY KHEKALEEQW EEMLNLTTRL
401: CWVLVKKEGY IAIWQKPVNN TCYLSRGAGV SPPLCNSEDD PDNVWYVDLK ACITRIEENG YGANLAPWPA RLLTPPDRLQ TIQIDSYIAR KELFVAESKY
501: WKEIISNYVN ALHWKQIGLR NVLDMRAGFG GFAAALAELK VDCWVLNVIP VSGPNTLPVI YDRGLLGVMH DWCEPFDTYP RTYDLLHAAG LFSIERKRCN
601: MTTMMLEMDR ILRPGGRVYI RDTINVTSEL QEIGNAMRWH TSLRETAEGP HSSYRVLLCE KRFESSEKRR TKKRRKTKGK RA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.