Factsheet for Bra020975.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 2
endoplasmic reticulum 2
plastid 1
mitochondrion 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76494	Canola	endoplasmic reticulum, golgi	96.81	98.46
Bra012557.1-P	Field mustard	cytosol, golgi, nucleus	94.97	94.18
AT4G19120.2	Thale cress	cytosol, endoplasmic reticulum, golgi	92.28	91.67
Bra013374.1-P	Field mustard	cytosol, golgi	93.62	78.92
Solyc08g075870.2.1	Tomato	nucleus, unclear	78.36	78.22
PGSC0003DMT400079286	Potato	cytosol	77.85	77.72
PGSC0003DMT400047515	Potato	cytosol, golgi, plasma membrane	77.01	76.88
Solyc08g005490.2.1	Tomato	nucleus, unclear	76.51	76.38
VIT_02s0033g01120.t01	Wine grape	cytosol	76.85	76.33
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	73.49	75.91
GSMUA_Achr4P27550_001	Banana	extracellular, plasma membrane	71.98	74.35
Bra023213.1-P	Field mustard	endoplasmic reticulum, golgi	73.32	72.83
Bra033872.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	72.15	71.31
GSMUA_Achr4P18470_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	69.97	69.73
Os04t0218400-00	Rice	cytosol	16.95	69.18
EER94413	Sorghum	plasma membrane	67.62	65.74
TraesCS1D01G202300.2	Wheat	endoplasmic reticulum	66.28	64.97
HORVU1Hr1G051470.3	Barley	endoplasmic reticulum	66.44	64.81
TraesCS1A01G198600.1	Wheat	golgi	66.28	62.9
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	66.28	62.01
GSMUA_Achr5P18010_001	Banana	nucleus	73.32	58.42
Bra000296.1-P	Field mustard	plastid	38.26	41.53
Bra039319.1-P	Field mustard	golgi	42.62	40.19
Bra037916.1-P	Field mustard	cytosol	42.11	40.16
Bra004933.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	42.11	39.72
Bra033172.1-P	Field mustard	cytosol	40.94	39.35
Bra008529.1-P	Field mustard	mitochondrion	40.94	39.29
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	40.77	39.19
Bra041005.1-P	Field mustard	cytosol	41.78	39.03
Bra016293.1-P	Field mustard	endoplasmic reticulum, golgi	39.6	38.63
Bra024678.1-P	Field mustard	endoplasmic reticulum, golgi	39.77	38.6
Bra012437.1-P	Field mustard	endoplasmic reticulum, golgi	39.43	38.27
Bra035476.1-P	Field mustard	cytosol	41.11	38.22
Bra000959.1-P	Field mustard	plastid	38.26	38.19
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	36.91	37.67
Bra001909.1-P	Field mustard	endoplasmic reticulum, golgi	35.23	34.65
Bra029822.1-P	Field mustard	mitochondrion, plastid	33.72	34.42
Bra006254.1-P	Field mustard	endoplasmic reticulum, golgi	34.9	34.21
Bra030570.1-P	Field mustard	endoplasmic reticulum, golgi	35.57	34.19
Bra014936.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	35.07	34.09
Bra009489.1-P	Field mustard	plastid	33.56	33.84
Bra015316.1-P	Field mustard	endoplasmic reticulum, golgi	35.07	33.55
Bra017538.1-P	Field mustard	golgi, plasma membrane	40.6	33.47
Bra037356.1-P	Field mustard	mitochondrion	38.76	33.38
Bra000145.1-P	Field mustard	endoplasmic reticulum	37.92	33.33
Bra010830.1-P	Field mustard	golgi	37.92	33.14
Bra005018.1-P	Field mustard	mitochondrion	37.75	32.42
Bra015681.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	35.23	32.41
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	36.41	32.1
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	38.93	30.45
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	37.92	30.13
Bra032319.1-P	Field mustard	cytosol	37.75	29.88
Bra025737.1-P	Field mustard	mitochondrion	30.37	25.14
Bra038881.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid, vacuole	36.41	24.06
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	36.58	23.34
Bra009158.1-P	Field mustard	cytosol	35.91	22.43
Bra036837.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid, vacuole	33.05	21.55
Bra031938.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	6.04	12.08

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	EnsemblPlantsGene:Bra020975	EnsemblPlants:Bra020975.1	EnsemblPlants:Bra020975.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	UniProt:M4DWS9	PFAM:PF03141	PANTHER:PTHR10108
PANTHER:PTHR10108:SF984	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0002545670

Description

AT4G19120 (E=0.0) ERD3 | ERD3 (early-responsive to dehydration 3)

Coordinates

chrA08:-:10822290..10824729

Molecular Weight (calculated)

68043.2 Da

IEP (calculated)

8.555

GRAVY (calculated)

-0.533

Length

596 amino acids

Sequence
(BLAST)

001: MKYKDEKYEK AERGSTRILP KTVLLILLCG LSFYLGGLYC GKNKLQVNDV AKAGSSVDVD NSPQAKSVSF PECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPNW YKSPIRWPKS KNECWYRNVP YDWINKQKSN QHWLKKEGEK FIFPGGGTMF PNGVSAYVDL MQDLIPEMKD GTIRTSIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALVRGIPA LLGIISTQRL PFPSKSFDMA HCSRCLIPWT EFGGVYLLEI HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTV EEQRSNYEKL QDLLTSMCFK LYAKKDDIAV WQKSPDNTCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLR KTDLESTPKW
401: PERLHSTPER VSDVPGGNGG LFKRDSSKWK TRAKHYKKLL PAIGSDKIRN VMDMNTAYGG LAAALVDDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SESQRCEMKY VMLEMDRILR PNGYAIIRES SYFANTIASV AKGLRWSCRK EQTESESENE KLLVCQKKLW YSSETK

Best Arabidopsis Sequence Match ( AT4G19120.1 )
(BLAST)

001: MKYKDEKYEK AEKGSRILPK TVLLILLCGL SFYLGGLYCG KNIIEVSDVA KAESSSLDVD DSLQVKSVSF SECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPDG YKPPIRWPKS KDECWYRNVP YDWINKQKSN QNWLRKEGEK FIFPGGGTMF PHGVSAYVDL MQDLIPEMKD GTIRTAIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSNSFDMA HCSRCLIPWT EFGGVYLLEV HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTI EEQRSNYEKL QELLSSMCFK MYAKKDDIAV WQKSPDNLCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLK KTDLESTPKW
401: PERLHTTPER ISDVPGGNGN VFKHDDSKWK TRAKHYKKLL PAIGSDKIRN VMDMNTAYGG LAAALVNDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SESQRCDMKY VMLEMDRILR PSGYAIIRES SYFADSIASV AKELRWSCRK EQTESASANE KLLICQKKLW YSSNASSETN

Arabidopsis Description

ERD3Probable methyltransferase PMT21 [Source:UniProtKB/Swiss-Prot;Acc:Q94II3]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.