Factsheet for Bra000296.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57187	Canola	cytosol	56.28	99.04
AT2G43200.2	Thale cress	endoplasmic reticulum, golgi	86.7	77.91
GSMUA_Achr5P25650_001	Banana	cytosol	39.89	56.74
VIT_05s0124g00530.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, vacuole	62.48	55.77
KRH01812	Soybean	extracellular, plasma membrane, vacuole	55.74	53.22
TraesCS3B01G427600.1	Wheat	cytosol	36.25	52.09
KRH46879	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	55.37	48.25
Bra012437.1-P	Field mustard	endoplasmic reticulum, golgi	49.36	44.14
Bra016293.1-P	Field mustard	endoplasmic reticulum, golgi	49.0	44.03
Bra024678.1-P	Field mustard	endoplasmic reticulum, golgi	49.18	43.97
Bra004933.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	50.27	43.67
Bra039319.1-P	Field mustard	golgi	49.91	43.35
Bra008529.1-P	Field mustard	mitochondrion	49.0	43.32
TraesCS3A01G395800.1	Wheat	endoplasmic reticulum	47.72	42.81
Bra033172.1-P	Field mustard	cytosol	48.27	42.74
TraesCS3D01G389400.1	Wheat	endoplasmic reticulum	47.36	42.69
Bra037916.1-P	Field mustard	cytosol	48.27	42.4
HORVU3Hr1G089210.3	Barley	vacuole	47.18	42.05
Bra041005.1-P	Field mustard	cytosol	48.63	41.85
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	47.18	41.77
Bra035476.1-P	Field mustard	cytosol	48.45	41.5
OQU88046	Sorghum	plastid	45.72	40.48
Bra023213.1-P	Field mustard	endoplasmic reticulum, golgi	43.53	39.83
Zm00001d042499_P001	Maize	plastid	45.17	39.24
Bra033872.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	42.81	38.97
Bra000959.1-P	Field mustard	plastid	42.26	38.86
Bra012557.1-P	Field mustard	cytosol, golgi, nucleus	42.44	38.77
Bra020975.1-P	Field mustard	endoplasmic reticulum, golgi	41.53	38.26
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	39.53	37.16
Bra017538.1-P	Field mustard	golgi, plasma membrane	47.72	36.24
Bra006254.1-P	Field mustard	endoplasmic reticulum, golgi	39.53	35.69
Bra030570.1-P	Field mustard	endoplasmic reticulum, golgi	39.89	35.32
Bra015316.1-P	Field mustard	endoplasmic reticulum, golgi	40.07	35.31
Bra001909.1-P	Field mustard	endoplasmic reticulum, golgi	38.62	34.98
Bra014936.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	38.62	34.58
Bra015681.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	40.8	34.57
Bra029822.1-P	Field mustard	mitochondrion, plastid	36.43	34.25
Bra009489.1-P	Field mustard	plastid	36.61	34.01
Bra037356.1-P	Field mustard	mitochondrion	42.08	33.38
Bra013374.1-P	Field mustard	cytosol, golgi	41.53	32.25
Bra000145.1-P	Field mustard	endoplasmic reticulum	39.16	31.71
Bra005018.1-P	Field mustard	mitochondrion	39.34	31.12
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	38.07	30.92
Bra010830.1-P	Field mustard	golgi	36.98	29.77
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	37.34	27.33
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	37.89	27.3
Bra032319.1-P	Field mustard	cytosol	36.79	26.83
Bra025737.1-P	Field mustard	mitochondrion	33.33	25.42
Bra009158.1-P	Field mustard	cytosol	40.44	23.27
Bra038881.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid, vacuole	37.34	22.73
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	36.43	21.41
Bra036837.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid, vacuole	33.52	20.13
Bra031938.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	4.92	9.06

Protein Annotations

EnsemblPlants:Bra000296.1	EnsemblPlants:Bra000296.1-P	EnsemblPlantsGene:Bra000296	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTases	ncoils:Coil	PANTHER:PTHR10108	PANTHER:PTHR10108:SF968	PFAM:PF03141	SEG:seg
SUPFAM:SSF53335	UniParc:UPI000253FCE1	UniProt:M4C7W8	MapMan:35.1	:	:

Description

AT2G43200 (E=5e-271) | dehydration-responsive family protein

Coordinates

chrA03:+:10398797..10400847

Molecular Weight (calculated)

63044.3 Da

IEP (calculated)

9.421

GRAVY (calculated)

-0.319

Length

549 amino acids

Sequence
(BLAST)

001: MHHHSSLQEP SISHYSSPPE PSANQPSPPS SSLSYFPLCP KNFTNYLPCH DPSTARQYSI ERHYRRERHC PDLSHEKKLR CLVPKPSGYK TPFHWPESRN
101: YAWFKNVPFK KLAEFKKTQN WVRLEGDRFV FPGGGTSFPG GVKDYVDVIM KVLPLASGSI RTVLDVGCGV ASFGAFLLNH NILTMSIAPR DIHEAQVQFA
201: LERGLPAMLG VLSTYKLPYP SKSFDMVHCS RCLVNWTAYD GLYLMEVDRV LRPGGYWVLS GPPVTSMVKA KNQKRSLQKE MEKLNDVFRR LCWEKIAERY
301: PVVIWRKPSN HLQCIKRLKA LKFPGRCSSG DPNAAWYKEM EPCITPLLNV NDTHIRVLRN WPERLNHVPE RHGVTISRFK ADTNLWQRIV VYYDTKLKFL
401: SNGKYRNIMD MNSGLGGFAA ALIKYPMWVM NVVPFDLEPN TLGVVFDRGL IGTYMNWCEA FSTYPRTYDL IHANGLFSLY LDKCDIVDIL LEMQRILRPE
501: GAVIIRDGFD VLMKVKAITN QMRWNGTMYS EADNSFDHGT ILIVDNSFK

Best Arabidopsis Sequence Match ( AT2G43200.1 )
(BLAST)

001: MNPSQQHLPK LCPKRLFLFF TPFLLFSLYY ILTTIKTITI SSQDRHHPPQ LHVPSISHYY SLPETSENRS SPPPLLLPPP PSSSSSLSSY FPLCPKNFTN
101: YLPCHDPSTA RQYSIERHYR RERHCPDIAQ EKFRCLVPKP TGYKTPFPWP ESRKYAWFRN VPFKRLAELK KTQNWVRLEG DRFVFPGGGT SFPGGVKDYV
201: DVILSVLPLA SGSIRTVLDI GCGVASFGAF LLNYKILTMS IAPRDIHEAQ VQFALERGLP AMLGVLSTYK LPYPSRSFDM VHCSRCLVNW TSYDGLYLME
301: VDRVLRPEGY WVLSGPPVAS RVKFKNQKRD SKELQNQMEK LNDVFRRLCW EKIAESYPVV IWRKPSNHLQ CRKRLKALKF PGLCSSSDPD AAWYKEMEPC
401: ITPLPDVNDT NKTVLKNWPE RLNHVPRMKT GSIQGTTIAG FKADTNLWQR RVLYYDTKFK FLSNGKYRNV IDMNAGLGGF AAALIKYPMW VMNVVPFDLK
501: PNTLGVVYDR GLIGTYMNWC EALSTYPRTY DLIHANGVFS LYLDKCDIVD ILLEMQRILR PEGAVIIRDR FDVLVKVKAI TNQMRWNGTM YPEDNSVFDH
601: GTILIVDNSI K

Arabidopsis Description

Probable methyltransferase PMT19 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW75]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.