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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, golgi, endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • extracellular 1
  • golgi 2
  • plasma membrane 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, golgi
Any Predictor:endoplasmic reticulum, golgi, nucleus
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76494 Canola endoplasmic reticulum, golgi 96.62 97.44
AT4G19120.2 Thale cress cytosol, endoplasmic reticulum, golgi 93.23 91.83
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 95.6 86.0
CDX98606 Canola vacuole 95.77 85.24
CDY61681 Canola endoplasmic reticulum, golgi 95.26 82.55
CDX78919 Canola cytosol, golgi 94.59 79.07
Solyc08g075870.2.1 Tomato nucleus, unclear 79.53 78.73
PGSC0003DMT400079286 Potato cytosol 79.02 78.22
PGSC0003DMT400047515 Potato cytosol, golgi, plasma membrane 78.34 77.55
Solyc08g005490.2.1 Tomato nucleus, unclear 77.83 77.05
VIT_02s0033g01120.t01 Wine grape cytosol 78.0 76.83
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 74.96 76.78
GSMUA_Achr4P27550_001 Banana extracellular, plasma membrane 73.43 75.22
CDY12278 Canola endoplasmic reticulum, golgi 74.28 73.17
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 74.28 72.8
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 74.28 72.8
CDY22567 Canola endoplasmic reticulum, golgi 73.6 72.5
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 73.94 72.47
GSMUA_Achr4P18470_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 71.74 70.9
Os04t0218400-00 Rice cytosol 17.26 69.86
EER94413 Sorghum plasma membrane 69.04 66.56
TraesCS1D01G202300.2 Wheat endoplasmic reticulum 67.34 65.46
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 67.51 65.3
TraesCS1A01G198600.1 Wheat golgi 67.34 63.38
TraesCS1B01G213600.1 Wheat endoplasmic reticulum 67.34 62.48
GSMUA_Achr5P18010_001 Banana nucleus 74.62 58.96
CDX85977 Canola cytosol 37.73 46.17
CDX93797 Canola cytosol 37.56 45.96
CDY10370 Canola cytosol 20.64 44.36
CDY50730 Canola cytosol 37.23 44.35
CDY01971 Canola endoplasmic reticulum, extracellular 31.13 44.23
CDY70748 Canola cytosol, peroxisome 31.64 43.49
CDX83493 Canola golgi 30.29 43.24
CDY70936 Canola cytosol 13.37 43.17
CDX99540 Canola cytosol 38.41 42.27
CDY43336 Canola cytosol 13.71 42.19
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 43.99 41.4
CDX99539 Canola cytosol 42.98 40.64
CDY18904 Canola endoplasmic reticulum 43.49 40.6
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 43.32 40.51
CDY54063 Canola mitochondrion 37.9 40.43
CDX84046 Canola cytosol 41.79 40.36
CDX94256 Canola cytosol 41.62 39.74
CDY25257 Canola cytosol 41.46 39.52
CDY44966 Canola cytosol 41.46 39.52
CDY16198 Canola endoplasmic reticulum, golgi 40.44 39.44
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 41.46 39.39
CDY45006 Canola endoplasmic reticulum, golgi 40.27 39.34
CDY46435 Canola endoplasmic reticulum, golgi 40.1 39.3
CDY40268 Canola endoplasmic reticulum, golgi 40.27 39.27
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 41.12 39.19
CDX74348 Canola plastid 39.42 39.03
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 39.26 38.86
CDY07198 Canola mitochondrion 39.26 38.73
CDY57187 Canola cytosol 20.3 38.46
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 37.73 38.18
CDY51142 Canola cytosol 39.59 37.93
CDY68187 Canola mitochondrion 39.09 37.44
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 36.89 36.03
CDX94861 Canola endoplasmic reticulum, golgi 36.04 35.32
CDX92981 Canola endoplasmic reticulum, golgi 36.21 35.31
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 36.21 34.91
CDY08621 Canola mitochondrion, plastid 34.18 34.59
CDX70565 Canola endoplasmic reticulum 35.53 34.54
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 35.7 34.53
CDX78577 Canola endoplasmic reticulum, golgi 35.36 34.38
CDX86634 Canola endoplasmic reticulum, golgi 36.04 34.35
CDY15505 Canola endoplasmic reticulum, golgi 36.04 34.35
CDY00911 Canola mitochondrion 33.84 34.19
CDY07639 Canola endoplasmic reticulum 39.09 34.12
CDX89824 Canola endoplasmic reticulum, golgi 35.7 34.03
CDY24949 Canola endoplasmic reticulum, plasma membrane 38.75 33.88
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 35.53 33.87
CDX70263 Canola plastid 33.84 33.78
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 41.29 33.66
CDY20475 Canola endoplasmic reticulum, golgi 39.09 33.53
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 36.55 33.33
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 38.75 33.33
CDX74837 Canola mitochondrion 38.75 33.24
CDY24913 Canola mitochondrion 37.73 33.18
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 37.06 33.18
CDX87530 Canola cytosol, golgi, peroxisome, plastid 36.21 32.97
CDX84330 Canola endoplasmic reticulum, plasma membrane 39.42 32.68
CDY33299 Canola nucleus 32.66 31.95
CDX98897 Canola golgi, mitochondrion 36.55 31.17
CDY44314 Canola endoplasmic reticulum 38.75 30.78
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 39.59 30.71
CDX99828 Canola golgi 38.92 30.67
CDX94669 Canola endoplasmic reticulum 38.75 30.57
CDY48339 Canola cytosol 38.41 30.03
CDY66535 Canola nucleus 32.83 29.62
CDY31339 Canola plasma membrane 38.07 29.45
CDY39830 Canola plasma membrane 38.07 29.15
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.9 28.04
CDY66721 Canola golgi 24.7 27.6
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.9 26.67
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 33.67 25.95
CDY26666 Canola mitochondrion 31.3 25.8
CDY27362 Canola plasma membrane 43.99 25.77
CDY67390 Canola mitochondrion 31.13 25.56
CDX70102 Canola cytosol 37.23 23.38
CDY72237 Canola nucleus 8.8 12.97
CDY33300 Canola plastid 1.02 2.51
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078F8A8UniProt:A0A078F8A8EnsemblPlants:CDY09274
ProteinID:CDY09274ProteinID:CDY09274.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00001552001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF984InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EEFA8A:::
Description
BnaC03g63040DBnaC03g63040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8A8]
Coordinates
chrLK031994:-:245351..249595
Molecular Weight (calculated)
67400.3 Da
IEP (calculated)
8.321
GRAVY (calculated)
-0.543
Length
591 amino acids
Sequence
(BLAST)
001: MKYKDEKYEK AERGSTKILP KTVLLILLCG LSFYLGGFYC GKNKLQVNDV AKAGSSYNSP QSVSFPECSS DYQDYTPCTD PRKWKKYGTH RLTFMERHCP
101: PVFDRKQCLV PPPNGYKSPI RWPKSKNECW YRNVPYDWIN NQKSNQHWLK KEGEKFIFPG GGTMFPNGVS AYVDLMQDLI PEMKDGTIRT AIDTGCGVAS
201: WGGDLLDRGI LTVSLAPRDN HEAQVQFALE RGIPAILGII STQRLPFPSN SFDMAHCSRC LIPWTEFGGV YLLEIHRILR PGGFWVLSGP PVNYENRWKG
301: WDTTVEEQRS NYEKLQDLLS SMCFKLYAKK DDIAVWQKSP DNTCYNKLSN DPDAYPPKCD DSLEPDSAWY TPLRPCVVVP SPKLKKTDLE STPKWPERLH
401: STPERVSDVP GGNGGLFKRD SSKWKTRAKH YKKLLPAIGS DKIRNVMDMN TAYGGLAAAL VDDPLWVMNV VSSYAANTLP VVFDRGLIGT YHDWCEAFST
501: YPRTYDLLHV DGLFTSESQR CEMKYVMLEM DRILRPNGYA IIRESSYFAD TIASVAKGLR WSCRKEQTES ESENEKLLVC QKKLWYSSET K
Best Arabidopsis Sequence Match ( AT4G19120.1 )
(BLAST)
001: MKYKDEKYEK AEKGSRILPK TVLLILLCGL SFYLGGLYCG KNIIEVSDVA KAESSSLDVD DSLQVKSVSF SECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPDG YKPPIRWPKS KDECWYRNVP YDWINKQKSN QNWLRKEGEK FIFPGGGTMF PHGVSAYVDL MQDLIPEMKD GTIRTAIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSNSFDMA HCSRCLIPWT EFGGVYLLEV HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTI EEQRSNYEKL QELLSSMCFK MYAKKDDIAV WQKSPDNLCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLK KTDLESTPKW
401: PERLHTTPER ISDVPGGNGN VFKHDDSKWK TRAKHYKKLL PAIGSDKIRN VMDMNTAYGG LAAALVNDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SESQRCDMKY VMLEMDRILR PSGYAIIRES SYFADSIASV AKELRWSCRK EQTESASANE KLLICQKKLW YSSNASSETN
Arabidopsis Description
ERD3Probable methyltransferase PMT21 [Source:UniProtKB/Swiss-Prot;Acc:Q94II3]
SUBAcon: [cytosol,golgi,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.