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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 59.46 95.54
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 56.69 90.51
CDY18904 Canola endoplasmic reticulum 56.39 89.89
AT2G45750.1 Thale cress endoplasmic reticulum, golgi 55.1 88.11
KRH00647 Soybean cytosol 39.35 73.65
CDY01971 Canola endoplasmic reticulum, extracellular 30.03 72.84
CDY54063 Canola mitochondrion 37.36 68.05
HORVU2Hr1G095070.1 Barley cytosol 28.94 67.44
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 40.73 66.08
PGSC0003DMT400071370 Potato endoplasmic reticulum, golgi 40.63 64.47
Solyc01g091690.2.1 Tomato plastid 40.63 64.47
CDX85977 Canola cytosol 30.82 64.39
KRH48242 Soybean endoplasmic reticulum 40.54 63.81
VIT_15s0048g01940.t01 Wine grape mitochondrion 39.84 63.61
CDX93797 Canola cytosol 30.43 63.56
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, golgi 32.01 60.83
GSMUA_Achr5P13670_001 Banana plastid 35.48 60.17
TraesCS2A01G400300.1 Wheat mitochondrion 37.17 59.15
KXG26943 Sorghum plastid 37.46 58.97
TraesCS2B01G418400.1 Wheat golgi 36.87 58.31
TraesCS2D01G397900.1 Wheat mitochondrion 36.87 58.31
Zm00001d002625_P003 Maize mitochondrion 36.87 58.31
CDY50730 Canola cytosol 28.64 58.27
Os04t0570800-02 Rice golgi 37.17 58.05
Zm00001d026079_P001 Maize plastid 36.87 58.03
CDX99540 Canola cytosol 30.62 57.54
CDX84046 Canola cytosol 34.89 57.52
CDY70936 Canola cytosol 10.41 57.38
Os02t0675700-01 Rice mitochondrion 36.57 57.12
CDX94256 Canola cytosol 34.99 57.03
GSMUA_Achr5P03280_001 Banana plastid 32.41 56.97
TraesCS6B01G269400.1 Wheat mitochondrion, plastid 36.27 56.92
HORVU6Hr1G065360.4 Barley mitochondrion 36.37 56.9
CDX99539 Canola cytosol 35.18 56.8
CDY25257 Canola cytosol 34.89 56.77
CDY44966 Canola cytosol 34.79 56.61
TraesCS6D01G237200.1 Wheat golgi 36.08 56.61
TraesCS6A01G256000.1 Wheat mitochondrion 35.88 56.47
CDY70748 Canola cytosol, peroxisome 23.98 56.28
Zm00001d051442_P002 Maize plasma membrane 36.08 56.26
EES05735 Sorghum mitochondrion, plastid 36.27 54.95
CDY46435 Canola endoplasmic reticulum, golgi 31.52 52.74
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 32.31 52.58
CDY16198 Canola endoplasmic reticulum, golgi 31.52 52.48
CDY40268 Canola endoplasmic reticulum, golgi 31.52 52.48
CDX83493 Canola golgi 21.51 52.42
CDY45006 Canola endoplasmic reticulum, golgi 31.32 52.23
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 31.22 50.64
CDY57187 Canola cytosol 15.66 50.64
CDY22567 Canola endoplasmic reticulum, golgi 27.06 45.5
CDY12278 Canola endoplasmic reticulum, golgi 26.96 45.33
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 26.76 44.78
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 26.76 44.78
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 26.66 44.61
CDX76494 Canola endoplasmic reticulum, golgi 25.57 44.03
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 25.77 43.99
CDY68187 Canola mitochondrion 26.86 43.92
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 31.12 43.31
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 24.08 40.7
CDX74348 Canola plastid 23.89 40.37
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 26.07 40.03
CDY07198 Canola mitochondrion 23.69 39.9
CDX98606 Canola vacuole 26.16 39.76
CDY51142 Canola cytosol 24.08 39.38
CDY10370 Canola cytosol 10.6 38.91
CDY61681 Canola endoplasmic reticulum, golgi 26.07 38.56
CDY43336 Canola cytosol 7.33 38.54
CDX89824 Canola endoplasmic reticulum, golgi 23.29 37.9
CDX94861 Canola endoplasmic reticulum, golgi 22.6 37.81
CDX78919 Canola cytosol, golgi 26.36 37.62
CDX86634 Canola endoplasmic reticulum, golgi 23.09 37.58
CDY15505 Canola endoplasmic reticulum, golgi 23.09 37.58
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 23.09 37.58
CDX78577 Canola endoplasmic reticulum, golgi 22.6 37.5
CDX92981 Canola endoplasmic reticulum, golgi 22.5 37.46
CDX70565 Canola endoplasmic reticulum 22.5 37.34
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 22.4 36.87
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 22.3 36.82
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 23.19 36.11
CDX87530 Canola cytosol, golgi, peroxisome, plastid 23.09 35.9
CDX74837 Canola mitochondrion 24.08 35.27
CDY24949 Canola endoplasmic reticulum, plasma membrane 23.59 35.21
CDY07639 Canola endoplasmic reticulum 23.49 35.01
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 20.22 34.93
CDY20475 Canola endoplasmic reticulum, golgi 23.69 34.69
CDY08621 Canola mitochondrion, plastid 19.92 34.42
CDX70263 Canola plastid 20.12 34.29
CDY00911 Canola mitochondrion 19.72 34.02
CDX98897 Canola golgi, mitochondrion 23.09 33.62
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 20.02 33.39
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 21.41 31.44
CDY33299 Canola nucleus 18.43 30.79
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 20.12 30.76
CDX84330 Canola endoplasmic reticulum, plasma membrane 21.61 30.57
CDY24913 Canola mitochondrion 20.02 30.06
CDX99828 Canola golgi 21.61 29.07
CDY44314 Canola endoplasmic reticulum 21.41 29.03
CDY66535 Canola nucleus 18.83 29.01
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 21.8 28.87
CDY48339 Canola cytosol 21.61 28.84
CDY31339 Canola plasma membrane 21.8 28.8
CDX94669 Canola endoplasmic reticulum 21.31 28.7
CDY39830 Canola plasma membrane 21.8 28.5
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 21.9 27.66
CDY66721 Canola golgi 14.07 26.84
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 21.9 26.31
CDY26666 Canola mitochondrion 18.34 25.8
CDY67390 Canola mitochondrion 18.24 25.56
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 19.33 25.42
CDX70102 Canola cytosol 23.39 25.08
CDY72237 Canola nucleus 5.85 14.71
CDY33300 Canola plastid 0.89 3.77
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10Gene3D:3.40.50.150GO:A0A078GQ80UniProt:A0A078GQ80
EnsemblPlants:CDY27362ProteinID:CDY27362ProteinID:CDY27362.1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00037302001InterPro:IPR001841InterPro:IPR013083PFAM:PF03141PFAM:PF13639
PFscan:PS50089PANTHER:PTHR10108PANTHER:PTHR10108:SF1059InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSMART:SM00184
SUPFAM:SSF53335SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI0004EE292FInterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
BnaC04g50430DBnaC04g50430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQ80]
Coordinates
chrLK032203:-:248325..253158
Molecular Weight (calculated)
114835.0 Da
IEP (calculated)
6.598
GRAVY (calculated)
-0.340
Length
1009 amino acids
Sequence
(BLAST)
0001: MNLFTRASPR DKKSNLYYIT LIGLLCIGSY LLGIWRTSSV IPRAAFDYSS GPPCEKFSKT TSTRDLDFNT HHNPHDPPPV KAATVSFPSC GAKLSEHTPC
0101: EDAKRSLKFP RGRLEYRQRH CPEREEALKC RIPAPYGYKT PFRWPESRDV AWFANVPHTE LTVEKKNQNW VRYENDRFWF PGGGTMFPRG ADSYIDDIGQ
0201: LIDLSHGSIR TAIDTGCGVA SFGAYLLSRN ITTMSFAPRD THEAQVQFAL ERGVPAMIGI MATIRLPYPS RAFDLAHCSR CLIPWGQNGG VYLMEVDRVL
0301: RPGGYWILSG PPINWQNRWK GWERTMDDLN TEQTQIEQVA RSLCWKKVVQ RDDLAIWQKP FNHIHCKKNK QVLKKPKFCR HDQDPDMAWY MKMDSCLTPL
0401: PEVDEDEDLK TVAGGKVEKW PARLNAVPPR INKGDLKEIT PEGFLEDTKL WKQRVSYYKK LDYQLGETGR YRNLLDMNAY VGGFAAALAD EPVWVMNVVP
0501: VEAKLNTLGV IYERGLIGTY QNWCEAMSTY PRTYDFIHAD SVFTLYQDKC EPEDILLEMD RILRPGGGVI IRDDVDVLIK VKELTKGLQW EGRIADHEKS
0601: PHERVKIYYA VKQYWTVTAP EEDKNNPIFH HCLCSDTVKM HPVSSSSSSS SSSPATNDIS TPLLNRNRPR SSQPLRGAAS RLLRRASSRG MMLRESSVRV
0701: RETAAEQIEE RQSEWAYSKP VIVLDVVWNL AFVFVTVGVL WFRSEENPRV PLRFWIVVYN LQCLLHVACV VSEYCRRHGY DRLNRDLDSG LTSSEGSSED
0801: ESDGPEIESG TSLAKHLEST NAMFSFVWWI IGFYWVSAGS EELAQSSPQL YWLCVAFLAF DVIFLVLCVA VASLIAIAVC CCLPCIIAVL YALAEREGAS
0901: DEEIERLPRF KFLTVRNSEK VNGEILETHG GIMTQLGVDS PSERVLSSDE AECCVCLCEY EDGTELRELW CRHHFHEACI DKWLRINATC PLCKSNILKT
1001: DEQSGNDAV
Best Arabidopsis Sequence Match ( AT2G45750.1 )
(BLAST)
001: MNLFTRISSR TKKANLYYVT LVALLCIASY LLGIWQNTAV NPRAAFDDSD GTPCEGFTRP NSTKDLDFDA HHNIQDPPPV TETAVSFPSC AAALSEHTPC
101: EDAKRSLKFS RERLEYRQRH CPEREEILKC RIPAPYGYKT PFRWPASRDV AWFANVPHTE LTVEKKNQNW VRYENDRFWF PGGGTMFPRG ADAYIDDIGR
201: LIDLSDGSIR TAIDTGCGVA SFGAYLLSRN ITTMSFAPRD THEAQVQFAL ERGVPAMIGI MATIRLPYPS RAFDLAHCSR CLIPWGQNDG AYLMEVDRVL
301: RPGGYWILSG PPINWQKRWK GWERTMDDLN AEQTQIEQVA RSLCWKKVVQ RDDLAIWQKP FNHIDCKKTR EVLKNPEFCR HDQDPDMAWY TKMDSCLTPL
401: PEVDDAEDLK TVAGGKVEKW PARLNAIPPR VNKGALEEIT PEAFLENTKL WKQRVSYYKK LDYQLGETGR YRNLVDMNAY LGGFAAALAD DPVWVMNVVP
501: VEAKLNTLGV IYERGLIGTY QNWCEAMSTY PRTYDFIHAD SVFTLYQGQC EPEEILLEMD RILRPGGGVI IRDDVDVLIK VKELTKGLEW EGRIADHEKG
601: PHEREKIYYA VKQYWTVPAP DEDKNNTSAL S
Arabidopsis Description
Probable methyltransferase PMT16 [Source:UniProtKB/Swiss-Prot;Acc:O80844]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.