Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 4
  • extracellular 3
  • vacuole 3
  • plasma membrane 3
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023213.1-P Field mustard endoplasmic reticulum, golgi 99.5 99.5
CDY22567 Canola endoplasmic reticulum, golgi 98.83 98.83
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 96.0 95.52
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 95.83 95.36
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 95.5 95.02
AT1G31850.3 Thale cress cytosol, endoplasmic reticulum, golgi 92.83 92.37
PGSC0003DMT400047515 Potato cytosol, golgi, plasma membrane 76.17 76.55
KRH76381 Soybean cytosol, golgi, plasma membrane 76.0 76.38
KRH39668 Soybean endoplasmic reticulum 75.67 76.05
Solyc08g005490.2.1 Tomato nucleus, unclear 75.5 75.88
KRH07708 Soybean cytosol 74.83 75.08
KRH07206 Soybean cytosol, golgi, plasma membrane 74.5 74.75
GSMUA_Achr4P27550_001 Banana extracellular, plasma membrane 71.83 74.7
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 73.17 74.28
CDX76494 Canola endoplasmic reticulum, golgi 72.5 74.23
Solyc08g075870.2.1 Tomato nucleus, unclear 73.67 74.04
PGSC0003DMT400079286 Potato cytosol 73.17 73.53
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 70.67 73.48
Os04t0218400-00 Rice cytosol 17.83 73.29
KRH07208 Soybean cytosol 73.5 73.01
GSMUA_Achr4P18470_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 70.83 71.07
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 74.17 67.73
CDX98606 Canola vacuole 74.17 67.02
EER94413 Sorghum plasma membrane 67.67 66.23
TraesCS1D01G202300.2 Wheat endoplasmic reticulum 66.17 65.3
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 65.67 64.48
CDY61681 Canola endoplasmic reticulum, golgi 73.0 64.22
TraesCS1A01G198600.1 Wheat golgi 66.0 63.06
CDX78919 Canola cytosol, golgi 73.67 62.52
TraesCS1B01G213600.1 Wheat endoplasmic reticulum 66.17 62.32
GSMUA_Achr5P18010_001 Banana nucleus 71.5 57.35
CDX85977 Canola cytosol 38.17 47.41
CDY01971 Canola endoplasmic reticulum, extracellular 32.67 47.12
CDX93797 Canola cytosol 37.83 47.0
CDY70936 Canola cytosol 14.0 45.9
CDY50730 Canola cytosol 37.83 45.77
CDY70748 Canola cytosol, peroxisome 32.33 45.12
CDX83493 Canola golgi 30.5 44.2
CDX99540 Canola cytosol 39.17 43.76
CDY54063 Canola mitochondrion 40.33 43.68
CDY10370 Canola cytosol 20.0 43.64
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 45.33 43.31
CDX84046 Canola cytosol 44.17 43.3
CDY43336 Canola cytosol 13.83 43.23
CDY18904 Canola endoplasmic reticulum 45.33 42.97
CDX99539 Canola cytosol 44.67 42.88
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 45.0 42.72
CDX94256 Canola cytosol 44.0 42.65
CDY25257 Canola cytosol 43.83 42.42
CDY44966 Canola cytosol 43.5 42.1
CDY46435 Canola endoplasmic reticulum, golgi 42.0 41.79
CDY57187 Canola cytosol 21.67 41.67
CDY45006 Canola endoplasmic reticulum, golgi 41.83 41.49
CDY40268 Canola endoplasmic reticulum, golgi 41.67 41.25
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 42.5 41.0
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 42.33 40.97
CDY16198 Canola endoplasmic reticulum, golgi 41.33 40.92
CDX74348 Canola plastid 38.67 38.86
CDY68187 Canola mitochondrion 39.83 38.74
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 38.5 38.69
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 37.33 38.36
CDY07198 Canola mitochondrion 38.0 38.06
CDY51142 Canola cytosol 39.0 37.93
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 37.33 37.02
CDX94861 Canola endoplasmic reticulum, golgi 35.5 35.32
CDX92981 Canola endoplasmic reticulum, golgi 35.67 35.31
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 42.67 35.31
CDY08621 Canola mitochondrion, plastid 33.67 34.59
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 35.33 34.58
CDY00911 Canola mitochondrion 33.67 34.53
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 35.0 34.37
CDX70565 Canola endoplasmic reticulum 34.5 34.05
CDX86634 Canola endoplasmic reticulum, golgi 35.17 34.03
CDX89824 Canola endoplasmic reticulum, golgi 35.17 34.03
CDY15505 Canola endoplasmic reticulum, golgi 35.17 34.03
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 37.33 33.94
CDX78577 Canola endoplasmic reticulum, golgi 34.33 33.88
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 34.83 33.71
CDX70263 Canola plastid 33.0 33.45
CDX87530 Canola cytosol, golgi, peroxisome, plastid 36.0 33.28
CDY24913 Canola mitochondrion 37.17 33.18
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 37.83 33.04
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 35.67 33.02
CDY07639 Canola endoplasmic reticulum 37.0 32.79
CDY24949 Canola endoplasmic reticulum, plasma membrane 36.83 32.69
CDY20475 Canola endoplasmic reticulum, golgi 37.5 32.66
CDX74837 Canola mitochondrion 37.0 32.22
CDX98897 Canola golgi, mitochondrion 36.83 31.89
CDY33299 Canola nucleus 31.83 31.62
CDX84330 Canola endoplasmic reticulum, plasma membrane 37.5 31.56
CDY44314 Canola endoplasmic reticulum 37.33 30.11
CDX99828 Canola golgi 37.33 29.87
CDX94669 Canola endoplasmic reticulum 37.17 29.77
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 37.67 29.66
CDY48339 Canola cytosol 37.33 29.63
CDY31339 Canola plasma membrane 37.5 29.45
CDY39830 Canola plasma membrane 37.67 29.27
CDY66535 Canola nucleus 31.83 29.16
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.0 27.78
CDY66721 Canola golgi 24.0 27.22
CDY27362 Canola plasma membrane 45.33 26.96
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.0 26.43
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 33.0 25.81
CDY26666 Canola mitochondrion 30.67 25.66
CDY67390 Canola mitochondrion 30.5 25.42
CDX70102 Canola cytosol 37.17 23.7
CDY72237 Canola nucleus 8.5 12.72
CDY33300 Canola plastid 1.17 2.93
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078FJK3UniProt:A0A078FJK3EnsemblPlants:CDY12278
ProteinID:CDY12278ProteinID:CDY12278.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00061342001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF984InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EDBD84:::
Description
BnaA09g24780DBnaA09g24780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJK3]
Coordinates
chrLK032019:-:373091..377167
Molecular Weight (calculated)
68314.0 Da
IEP (calculated)
8.715
GRAVY (calculated)
-0.454
Length
600 amino acids
Sequence
(BLAST)
001: MKNGKQPEKG SSRIFSLTVL FIALCGFSFY LGGMFCSERD KIEAKDVTST TTKAVASPKE PTVSALQIKS VSFPECGSDL QDYTPCTDPK RWKRYGVHRL
101: SFLERHCPPV HEKSECLIPP PDGYKPPIRW PKSRDQCWYK NVPYDWINKQ KSNQHWLKKE GDKFHFPGGG TMFPRGVSHY VDQMQDLIPE MKDGTVRTAI
201: DTGCGVASWG GDLLDRGILT ISLAPRDNHE AQVQFALERG IPAILGIIST QRLPFPSNSF DMAHCSRCLI PWTEFGGIYL LEVHRIVRPG GFWVLSGPPV
301: NYKRRWRGWN TTMEDQKSDY DKLQSLLTSM CFKKYAQKDD IAVWQKLSDK SCYDKIAKNM EAYPPKCDDS IEPDSAWYTP LRPCVVAPTL KVKKSGLGSI
401: PKWPERLNVA PERISDVHGG SASGLKHDDG KWKNRVKHYK KVLPALGTDK IRNVMDMNTV YGGFAAALVQ DPVWVMNVVS SYSANTLPVV FDRGLIGTYH
501: DWCEAFSTYP RTYDLLHLDS LFTLESQRCE MKYVLLEMDR ILRPGGYVIM RESSYFMDAL TTLGKGMRWS CRREETEYAV ESEKILVCQK KLWFSSNQTS
Best Arabidopsis Sequence Match ( AT1G31850.1 )
(BLAST)
001: MKSGKQSSQP EKGTSRILSL TVLFIAFCGF SFYLGGIFCS ERDKIVAKDV TRTTTKAVAS PKEPTATPIQ IKSVSFPECG SEFQDYTPCT DPKRWKKYGV
101: HRLSFLERHC PPVYEKNECL IPPPDGYKPP IRWPKSREQC WYRNVPYDWI NKQKSNQHWL KKEGDKFHFP GGGTMFPRGV SHYVDLMQDL IPEMKDGTVR
201: TAIDTGCGVA SWGGDLLDRG ILSLSLAPRD NHEAQVQFAL ERGIPAILGI ISTQRLPFPS NAFDMAHCSR CLIPWTEFGG IYLLEIHRIV RPGGFWVLSG
301: PPVNYNRRWR GWNTTMEDQK SDYNKLQSLL TSMCFKKYAQ KDDIAVWQKL SDKSCYDKIA KNMEAYPPKC DDSIEPDSAW YTPLRPCVVA PTPKVKKSGL
401: GSIPKWPERL HVAPERIGDV HGGSANSLKH DDGKWKNRVK HYKKVLPALG TDKIRNVMDM NTVYGGFSAA LIEDPIWVMN VVSSYSANSL PVVFDRGLIG
501: TYHDWCEAFS TYPRTYDLLH LDSLFTLESH RCEMKYILLE MDRILRPSGY VIIRESSYFM DAITTLAKGI RWSCRREETE YAVKSEKILV CQKKLWFSSN
601: QTS
Arabidopsis Description
Probable methyltransferase PMT20 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S7]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.