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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, golgi

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • extracellular 2
  • golgi 3
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:secretory
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013374.1-P Field mustard cytosol, golgi 99.86 99.86
CDY61681 Canola endoplasmic reticulum, golgi 91.51 94.87
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 79.07 94.59
CDX76494 Canola endoplasmic reticulum, golgi 77.93 94.03
AT4G19120.2 Thale cress cytosol, endoplasmic reticulum, golgi 79.07 93.17
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 78.22 84.17
CDX98606 Canola vacuole 78.5 83.58
Solyc08g075870.2.1 Tomato nucleus, unclear 65.77 77.89
PGSC0003DMT400079286 Potato cytosol 65.35 77.39
VIT_02s0033g01120.t01 Wine grape cytosol 65.35 77.0
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 62.66 76.78
PGSC0003DMT400047515 Potato cytosol, golgi, plasma membrane 64.78 76.72
Solyc08g005490.2.1 Tomato nucleus, unclear 64.36 76.21
GSMUA_Achr4P27550_001 Banana extracellular, plasma membrane 61.39 75.22
CDY12278 Canola endoplasmic reticulum, golgi 62.52 73.67
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 62.52 73.3
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 62.52 73.3
CDY22567 Canola endoplasmic reticulum, golgi 62.09 73.17
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 62.23 72.97
Os04t0218400-00 Rice cytosol 14.57 70.55
GSMUA_Achr4P18470_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 59.55 70.4
EER94413 Sorghum plasma membrane 57.99 66.88
TraesCS1D01G202300.2 Wheat endoplasmic reticulum 56.86 66.12
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 56.86 65.79
TraesCS1A01G198600.1 Wheat golgi 56.86 64.01
TraesCS1B01G213600.1 Wheat endoplasmic reticulum 56.86 63.11
GSMUA_Achr5P18010_001 Banana nucleus 62.38 58.96
CDX85977 Canola cytosol 31.68 46.38
CDX93797 Canola cytosol 31.54 46.17
CDY50730 Canola cytosol 31.26 44.56
CDY10370 Canola cytosol 17.26 44.36
CDY01971 Canola endoplasmic reticulum, extracellular 26.03 44.23
CDX83493 Canola golgi 25.32 43.24
CDY70936 Canola cytosol 11.17 43.17
CDY70748 Canola cytosol, peroxisome 26.17 43.02
CDX99540 Canola cytosol 32.67 43.02
CDY43336 Canola cytosol 11.46 42.19
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 37.2 41.88
CDX99539 Canola cytosol 36.35 41.12
CDY18904 Canola endoplasmic reticulum 36.63 40.92
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 36.49 40.82
CDY54063 Canola mitochondrion 31.97 40.79
CDX84046 Canola cytosol 35.22 40.69
CDX94256 Canola cytosol 35.22 40.23
CDY25257 Canola cytosol 35.08 40.0
CDY44966 Canola cytosol 34.94 39.84
CDY45006 Canola endoplasmic reticulum, golgi 33.66 39.34
CDY46435 Canola endoplasmic reticulum, golgi 33.52 39.3
CDY16198 Canola endoplasmic reticulum, golgi 33.66 39.27
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 34.51 39.23
CDY40268 Canola endoplasmic reticulum, golgi 33.52 39.11
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 34.23 39.03
CDY57187 Canola cytosol 17.11 38.78
CDX74348 Canola plastid 32.39 38.36
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 31.68 38.36
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 32.25 38.19
CDY07198 Canola mitochondrion 32.25 38.06
CDY51142 Canola cytosol 32.53 37.28
CDY68187 Canola mitochondrion 32.53 37.28
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 30.98 36.2
CDX94861 Canola endoplasmic reticulum, golgi 30.13 35.32
CDX92981 Canola endoplasmic reticulum, golgi 30.27 35.31
CDX70565 Canola endoplasmic reticulum 30.13 35.03
CDX78577 Canola endoplasmic reticulum, golgi 29.99 34.87
CDX86634 Canola endoplasmic reticulum, golgi 30.41 34.68
CDX89824 Canola endoplasmic reticulum, golgi 30.41 34.68
CDY15505 Canola endoplasmic reticulum, golgi 30.41 34.68
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 29.99 34.58
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 29.84 34.53
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 30.27 34.52
CDY08621 Canola mitochondrion, plastid 28.43 34.42
CDY00911 Canola mitochondrion 28.43 34.36
CDX70263 Canola plastid 28.57 34.12
CDY07639 Canola endoplasmic reticulum 32.67 34.12
CDY24949 Canola endoplasmic reticulum, plasma membrane 32.53 34.02
CDY20475 Canola endoplasmic reticulum, golgi 33.1 33.96
CDX74837 Canola mitochondrion 32.67 33.53
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 34.37 33.52
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 31.26 33.48
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 30.55 33.33
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 32.39 33.33
CDY24913 Canola mitochondrion 31.68 33.33
CDX87530 Canola cytosol, golgi, peroxisome, plastid 30.41 33.13
CDX84330 Canola endoplasmic reticulum, plasma membrane 32.81 32.54
CDY33299 Canola nucleus 27.3 31.95
CDX98897 Canola golgi, mitochondrion 30.98 31.6
CDY44314 Canola endoplasmic reticulum 32.39 30.78
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 32.96 30.58
CDX94669 Canola endoplasmic reticulum 32.39 30.57
CDX99828 Canola golgi 32.39 30.53
CDY48339 Canola cytosol 31.97 29.89
CDY66535 Canola nucleus 27.58 29.77
CDY31339 Canola plasma membrane 32.11 29.71
CDY39830 Canola plasma membrane 32.11 29.4
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 31.82 28.16
CDY66721 Canola golgi 20.65 27.6
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 31.82 26.79
CDY27362 Canola plasma membrane 37.62 26.36
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 28.29 26.08
CDY26666 Canola mitochondrion 26.17 25.8
CDY67390 Canola mitochondrion 26.03 25.56
CDX70102 Canola cytosol 31.54 23.7
CDY72237 Canola nucleus 7.64 13.47
CDY33300 Canola plastid 0.85 2.51
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078CS80EnsemblPlants:CDX78919ProteinID:CDX78919
ProteinID:CDX78919.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00131409001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF984InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EF2E75SEG:seg:
Description
BnaA01g09860D
Coordinates
chrLK031816:-:812514..817381
Molecular Weight (calculated)
81091.0 Da
IEP (calculated)
7.138
GRAVY (calculated)
-0.471
Length
707 amino acids
Sequence
(BLAST)
001: MKYKDEKYEK AEKGSLKVLP KTVLLILLCG LSFYLGGLYY GKNIVEVSNV AKTGSSLDVD NSLQVKSVSF SECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPNG YKPPIRWPKS KDECWYRNVP YDWINKQKSN QHWLKKEGEK FIFPGGGTMF PNGVSAYVDL MQDLIPEMKD GTIRTAIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSNSFDMA HCSRCLIPWT EFGGVYLLEI HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTV EEQRSNYEKL QDLLTSMCFK LYAKKDDIAV WQKSPDNMCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLK KTDLESTPKW
401: PERLHSTPER ISDVPGGNGG LFKRDDSKWK TRAKHYKKLL PAVGSDKIRN VMDMNTAYGG LAAALVDDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SENQRCEMKY VMLEMDRILR PNGYAIIRES SYFADTIASV AKELRWSCRK EKTESESESE KLLICQKKLW LLENNVTTTT
601: IDDINIDFYH EKLLRYVTEV DYDQSILVWH IATEMLHQTD IACSDYMMYL LIVQPSLMST VAGIDKTQRL HVKKHEEQNE NAREYSSKSV LFQACMLAKE
701: LKRIQEQ
Best Arabidopsis Sequence Match ( AT4G19120.1 )
(BLAST)
001: MKYKDEKYEK AEKGSRILPK TVLLILLCGL SFYLGGLYCG KNIIEVSDVA KAESSSLDVD DSLQVKSVSF SECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPDG YKPPIRWPKS KDECWYRNVP YDWINKQKSN QNWLRKEGEK FIFPGGGTMF PHGVSAYVDL MQDLIPEMKD GTIRTAIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSNSFDMA HCSRCLIPWT EFGGVYLLEV HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTI EEQRSNYEKL QELLSSMCFK MYAKKDDIAV WQKSPDNLCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLK KTDLESTPKW
401: PERLHTTPER ISDVPGGNGN VFKHDDSKWK TRAKHYKKLL PAIGSDKIRN VMDMNTAYGG LAAALVNDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SESQRCDMKY VMLEMDRILR PSGYAIIRES SYFADSIASV AKELRWSCRK EQTESASANE KLLICQKKLW YSSNASSETN
Arabidopsis Description
ERD3Probable methyltransferase PMT21 [Source:UniProtKB/Swiss-Prot;Acc:Q94II3]
SUBAcon: [cytosol,golgi,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.