Factsheet for Solyc06g035790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065051	Potato	plastid	95.39	94.95
Solyc03g026120.2.1	Tomato	plastid	79.26	79.38
Solyc01g009600.2.1	Tomato	plastid	70.66	72.56
HORVU2Hr1G095070.1	Barley	cytosol	47.16	70.9
VIT_16s0100g00570.t01	Wine grape	mitochondrion	70.35	69.82
KRH09116	Soybean	endoplasmic reticulum	65.44	67.41
KRH38569	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	65.28	67.14
KRG91450	Soybean	mitochondrion	60.98	66.17
GSMUA_Achr5P13670_001	Banana	plastid	59.6	65.21
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, golgi	52.84	64.78
Solyc01g091690.2.1	Tomato	plastid	62.67	64.15
KXG26943	Sorghum	plastid	63.13	64.12
Zm00001d002625_P003	Maize	mitochondrion	62.83	64.11
Zm00001d026079_P001	Maize	plastid	62.83	63.81
TraesCS2A01G400300.1	Wheat	mitochondrion	62.06	63.72
TraesCS2D01G397900.1	Wheat	mitochondrion	62.37	63.64
TraesCS2B01G418400.1	Wheat	golgi	62.06	63.32
HORVU6Hr1G065360.4	Barley	mitochondrion	62.21	62.79
TraesCS6D01G237200.1	Wheat	golgi	61.9	62.67
Os04t0570800-02	Rice	golgi	62.06	62.54
Os02t0675700-01	Rice	mitochondrion	61.75	62.23
TraesCS6A01G256000.1	Wheat	mitochondrion	61.14	62.09
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	61.29	62.05
Zm00001d051442_P002	Maize	plasma membrane	61.44	61.82
EES05735	Sorghum	mitochondrion, plastid	62.98	61.56
GSMUA_Achr5P03280_001	Banana	plastid	53.15	60.28
Solyc08g013740.2.1	Tomato	unclear	56.22	58.0
Solyc03g116150.2.1	Tomato	nucleus	49.77	55.48
Solyc06g069870.2.1	Tomato	endoplasmic reticulum	52.23	55.28
Solyc01g010870.2.1	Tomato	nucleus, unclear	51.0	54.7
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	51.15	54.41
Solyc08g077240.2.1	Tomato	nucleus	50.84	53.73
Solyc08g075870.2.1	Tomato	nucleus, unclear	41.01	44.72
Solyc08g005490.2.1	Tomato	nucleus, unclear	40.71	44.39
Solyc01g091640.2.1	Tomato	nucleus	38.1	41.4
Solyc03g005600.2.1	Tomato	nucleus, unclear	37.48	39.35
Solyc02g067890.2.1	Tomato	nucleus	36.87	39.34
Solyc09g090190.2.1	Tomato	nucleus	37.33	39.32
Solyc10g079450.1.1	Tomato	plasma membrane	33.95	36.17
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	34.41	33.04
Solyc06g051000.2.1	Tomato	plastid	32.57	33.02
Solyc04g058180.2.1	Tomato	plastid	31.34	31.58
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	34.87	29.56
Solyc05g056580.2.1	Tomato	golgi	35.18	28.17
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	32.87	27.44
Solyc04g080360.2.1	Tomato	nucleus	30.26	25.32
Solyc02g084670.2.1	Tomato	unclear	33.64	24.8

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0016740	GO:GO:0032259	UniProt:K4C4U9	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1049
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc06g035790.2	EnsemblPlants:Solyc06g035790.2.1	UniParc:UPI0002765D5C
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:25033752..25037135

Molecular Weight (calculated)

73907.8 Da

IEP (calculated)

8.250

GRAVY (calculated)

-0.449

Length

651 amino acids

Sequence
(BLAST)

001: MAGSNPTPYY TPTSKPTPTS HHSSLPLKKP NFYSLIAISF LCSGFYFTGV WHSSTTGAGA GSSSVFITTT SLPCFPSKNT STSPSSSTTS TKKLDFTTHH
101: SAAYDGAAPD DAIKIYPVCD IKYSEYTPCE DPERSLKFNR RRLIYRERHC PEKNEVLKCR IPAPYGYKNP FKWPVSRDVV WYANVPHKEL TVEKAVQNWI
201: RYEGDKFRFP GGGTMFPNGA DAYIDDIAKL INLKDGSIRT AIDTGCGVAS WGAYLLSRNI IAMSFAPRDS HEAQVQFALE RGVPALIGVI ASKRLPYPSR
301: AFDMAHCSRC LIPWGEYDGT YLIEVDRVLR PGGFWILSGP PINWKRHWKG WDRTREDLYA EQNKIEQLAK RLCWKKFVEK DDIAIWQKPF NHMKCTEFRN
401: RNKNPPMCPT QDPDKAWYTK IETCLTPLPE VASEEDLAGG QLEKWPKRLN AIPPRISRGT VDGVTAEVFQ KDSELWKRRV SYYKSVNNQL DQPGRYRNIL
501: DMNAFLGGFA ANLVNDPVWV MNIVPVEVKT NTLGAIYERG LIGTYQSWCE AMSTYPRTYD LIHADSVFTL YENRCEMEDI VLELDRILRP EGSVIIRDDV
601: DILIRVKRIA DGLNWDSLIV DHEDGPLERE KLFFAVKTYS TAPATQPSKT S

Best Arabidopsis Sequence Match ( AT4G00750.1 )
(BLAST)

001: MGNYRWPSKL SKLSLRAKQT NLYRVILIAI LCVTFYFVGV WQHSGRGISR SSISNHELTS VPCTFPHQTT PILNFASRHT APDLPPTITD ARVVQIPSCG
101: VEFSEYTPCE FVNRSLNFPR ERLIYRERHC PEKHEIVRCR IPAPYGYSLP FRWPESRDVA WFANVPHTEL TVEKKNQNWV RYEKDRFLFP GGGTMFPRGA
201: DAYIDEIGRL INLKDGSIRT AIDTGCGVAS FGAYLMSRNI VTMSFAPRDT HEAQVQFALE RGVPAIIGVL ASIRLPFPAR AFDIAHCSRC LIPWGQYNGT
301: YLIEVDRVLR PGGYWILSGP PINWQRHWKG WERTRDDLNS EQSQIERVAR SLCWRKLVQR EDLAVWQKPT NHVHCKRNRI ALGRPPFCHR TLPNQGWYTK
401: LETCLTPLPE VTGSEIKEVA GGQLARWPER LNALPPRIKS GSLEGITEDE FVSNTEKWQR RVSYYKKYDQ QLAETGRYRN FLDMNAHLGG FASALVDDPV
501: WVMNVVPVEA SVNTLGVIYE RGLIGTYQNW CEAMSTYPRT YDFIHADSVF SLYKDRCDME DILLEMDRIL RPKGSVIIRD DIDVLTKVKK ITDAMQWEGR
601: IGDHENGPLE REKILFLVKE YWTAPAPDQS SDP

Arabidopsis Description

Probable methyltransferase PMT15 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.