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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 2
  • cytosol 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol, plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:peroxisome
 endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 93.35 93.21
KRG91450 Soybean mitochondrion 71.36 75.17
KRH00647 Soybean cytosol 59.97 70.32
HORVU2Hr1G095070.1 Barley cytosol 47.78 69.75
PGSC0003DMT400037042 Potato plastid 69.94 68.32
Solyc03g026120.2.1 Tomato plastid 70.09 68.15
PGSC0003DMT400065051 Potato plastid 68.2 65.9
Solyc06g035790.2.1 Tomato plastid 67.41 65.44
GSMUA_Achr5P13670_001 Banana plastid 61.55 65.38
VIT_16s0100g00570.t01 Wine grape mitochondrion 67.72 65.24
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 63.45 64.47
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, golgi 53.96 64.22
PGSC0003DMT400030542 Potato plastid 64.08 63.58
Solyc01g009600.2.1 Tomato plastid 63.29 63.09
KXG26943 Sorghum plastid 63.61 62.71
Zm00001d026079_P001 Maize plastid 63.45 62.56
Zm00001d002625_P003 Maize mitochondrion 62.34 61.76
TraesCS6A01G256000.1 Wheat mitochondrion 62.5 61.62
TraesCS6D01G237200.1 Wheat golgi 62.66 61.59
HORVU6Hr1G065360.4 Barley mitochondrion 62.82 61.55
GSMUA_Achr5P03280_001 Banana plastid 55.85 61.5
TraesCS6B01G269400.1 Wheat mitochondrion, plastid 62.5 61.43
Os02t0675700-01 Rice mitochondrion 62.66 61.3
TraesCS2D01G397900.1 Wheat mitochondrion 61.87 61.29
TraesCS2A01G400300.1 Wheat mitochondrion 61.39 61.2
Os04t0570800-02 Rice golgi 62.18 60.84
TraesCS2B01G418400.1 Wheat golgi 61.23 60.66
KRH48242 Soybean endoplasmic reticulum 61.08 60.22
Zm00001d051442_P002 Maize plasma membrane 61.08 59.66
EES05735 Sorghum mitochondrion, plastid 61.55 58.41
KRH60099 Soybean cytosol 57.44 58.27
KRH41379 Soybean cytosol 56.96 57.23
KRH57576 Soybean endoplasmic reticulum 54.91 56.61
KRH04297 Soybean endoplasmic reticulum 54.59 56.28
KRH45909 Soybean endoplasmic reticulum 53.96 56.09
KRG99086 Soybean endoplasmic reticulum 53.8 55.92
KRH74853 Soybean endoplasmic reticulum, golgi 53.32 55.52
KRH70718 Soybean endoplasmic reticulum 53.16 55.35
KRH63351 Soybean endoplasmic reticulum 51.58 53.8
KRH54546 Soybean golgi 47.47 51.9
KRH01812 Soybean extracellular, plasma membrane, vacuole 43.51 47.83
KRH39668 Soybean endoplasmic reticulum 43.51 46.06
KRH76381 Soybean cytosol, golgi, plasma membrane 43.2 45.73
KRH07206 Soybean cytosol, golgi, plasma membrane 42.88 45.32
KRH07208 Soybean cytosol 42.88 44.87
KRH07708 Soybean cytosol 42.09 44.48
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 43.67 43.81
KRH48238 Soybean endoplasmic reticulum 39.08 41.58
KRH40535 Soybean plastid 39.08 41.37
KRH00643 Soybean endoplasmic reticulum, mitochondrion 38.61 40.94
KRH65147 Soybean endoplasmic reticulum 38.45 40.7
KRH32196 Soybean golgi 35.6 38.01
KRH19571 Soybean golgi 35.44 37.77
KRH34393 Soybean endoplasmic reticulum 36.39 37.04
KRH31698 Soybean endoplasmic reticulum 36.39 36.8
KRG92410 Soybean endoplasmic reticulum, golgi 36.08 36.77
KRH69085 Soybean endoplasmic reticulum, golgi 36.23 36.64
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 35.6 36.06
KRH31179 Soybean plasma membrane 33.86 36.03
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 36.23 36.01
KRH73268 Soybean endoplasmic reticulum 33.86 35.97
KRH73069 Soybean endoplasmic reticulum 36.87 35.41
KRG97843 Soybean endoplasmic reticulum 37.03 35.29
KRH14916 Soybean nucleus 33.23 35.29
KRH15065 Soybean nucleus 37.03 35.24
KRH31030 Soybean endoplasmic reticulum, plasma membrane 37.03 34.93
KRG97692 Soybean plastid 21.2 34.72
KRH72067 Soybean plastid 32.59 34.16
KRH16455 Soybean endoplasmic reticulum, golgi 35.44 33.94
KRH33118 Soybean extracellular, golgi, plastid 32.28 33.66
KRH18054 Soybean endoplasmic reticulum, golgi 35.13 33.48
KRH28732 Soybean endoplasmic reticulum 35.28 29.04
KRH05816 Soybean endoplasmic reticulum 31.96 28.9
KRH53915 Soybean endoplasmic reticulum 36.39 28.54
KRH15210 Soybean mitochondrion 31.65 28.13
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 35.28 28.02
KRH64022 Soybean endoplasmic reticulum 35.6 27.78
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 36.39 27.68
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.08 27.34
KRH53330 Soybean endoplasmic reticulum 36.08 27.31
KRH40943 Soybean golgi 35.92 26.96
KRH69842 Soybean mitochondrion 34.97 26.76
Protein Annotations
EntrezGene:100814235Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02010271EnsemblPlantsGene:GLYMA_16G197200GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:K7MIL2EnsemblPlants:KRH09116ProteinID:KRH09116ProteinID:KRH09116.1PFAM:PF03141
PANTHER:PTHR10108PANTHER:PTHR10108:SF1049InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelix
UniParc:UPI000233AF01SEG:seg::::
Description
hypothetical protein
Coordinates
chr16:-:35854742..35861472
Molecular Weight (calculated)
71823.5 Da
IEP (calculated)
8.619
GRAVY (calculated)
-0.505
Length
632 amino acids
Sequence
(BLAST)
001: MLNADSTSPY HPTAKPSKPT TTFFKKTNLY TLLAFLCIVS YLLGAYQGTT TKTTITTTTT TPCPQNPTLT TTTHLLDFSS HHNSTNLNPS TSTTLHFPPC
101: HVSLSEYTPC EDHARSLQYS RRRMVYRERH CPRNNEVLKC RVPAPHGYRN PFPWPASRDV AWYANVPHRE LTVEKAVQNW IRYDGDRFHF PGGGTMFPDG
201: ADKYIDDIAD LVNLRDGTVR TAVDTGCGVA SWGAYLLSRD IITVSIAPRD THEAQVQFAL ERGVPALIGV LASKRLPFPS RAFDMAHCSR CLIPWAEYDG
301: LYLNEIDRIL RPGGYWILSG PPIRWKKHWK GWERTKEDLN KEQTKIENAA KSLCWNKLVE KDDIAIWQKA KNHLDCKSNR KLTQNRPFCK AQNNPDKAWY
401: TDMQTCLSPM PEVSSKEETA GGALKKWPER LKATPPRISR GTIKGVNPET FSKDNELWKK RVAYYKKANN QLGKAGRYRN LLDMNAYLGG FAAALVDLPV
501: WVMNVVPVQA KVDTLGAIYE RGLIGTYHNW CEAMSTYPRT YDLIHADSLF SLYNDRCELE DILLEMDRIL RPEGSVIIRD DVDILVKVKS IVNGMDWDSQ
601: IVDHEDGPLE REKLLFAVKN YWTAPAASDK NS
Best Arabidopsis Sequence Match ( AT2G45750.1 )
(BLAST)
001: MNLFTRISSR TKKANLYYVT LVALLCIASY LLGIWQNTAV NPRAAFDDSD GTPCEGFTRP NSTKDLDFDA HHNIQDPPPV TETAVSFPSC AAALSEHTPC
101: EDAKRSLKFS RERLEYRQRH CPEREEILKC RIPAPYGYKT PFRWPASRDV AWFANVPHTE LTVEKKNQNW VRYENDRFWF PGGGTMFPRG ADAYIDDIGR
201: LIDLSDGSIR TAIDTGCGVA SFGAYLLSRN ITTMSFAPRD THEAQVQFAL ERGVPAMIGI MATIRLPYPS RAFDLAHCSR CLIPWGQNDG AYLMEVDRVL
301: RPGGYWILSG PPINWQKRWK GWERTMDDLN AEQTQIEQVA RSLCWKKVVQ RDDLAIWQKP FNHIDCKKTR EVLKNPEFCR HDQDPDMAWY TKMDSCLTPL
401: PEVDDAEDLK TVAGGKVEKW PARLNAIPPR VNKGALEEIT PEAFLENTKL WKQRVSYYKK LDYQLGETGR YRNLVDMNAY LGGFAAALAD DPVWVMNVVP
501: VEAKLNTLGV IYERGLIGTY QNWCEAMSTY PRTYDFIHAD SVFTLYQGQC EPEEILLEMD RILRPGGGVI IRDDVDVLIK VKELTKGLEW EGRIADHEKG
601: PHEREKIYYA VKQYWTVPAP DEDKNNTSAL S
Arabidopsis Description
Probable methyltransferase PMT16 [Source:UniProtKB/Swiss-Prot;Acc:O80844]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.