Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
nucleus: 21132161
endoplasmic reticulum: 27224218
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH48238 Soybean endoplasmic reticulum 94.97 95.45
KRH00643 Soybean endoplasmic reticulum, mitochondrion 84.59 84.73
KRH40535 Soybean plastid 84.59 84.59
VIT_15s0048g01990.t01 Wine grape mitochondrion 79.06 79.06
Solyc01g091640.2.1 Tomato nucleus 79.06 78.8
PGSC0003DMT400071375 Potato mitochondrion 78.89 78.63
AT4G00740.1 Thale cress golgi 77.22 76.83
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 76.72 76.72
Bra000959.1-P Field mustard plastid 76.38 76.38
CDX74348 Canola plastid 76.05 76.05
CDY07198 Canola mitochondrion 74.2 73.96
CDY51142 Canola cytosol 73.03 70.66
GSMUA_Achr5P20080_001 Banana mitochondrion 70.69 69.98
GSMUA_Achr11P... Banana golgi, mitochondrion 68.17 67.83
TraesCS2A01G400900.1 Wheat golgi, mitochondrion 63.48 65.8
TraesCS2B01G419000.1 Wheat golgi, plastid 63.65 65.74
TraesCS2D01G398400.1 Wheat golgi, mitochondrion, plastid 63.48 65.46
Os04t0569400-00 Rice golgi, mitochondrion 63.82 65.02
HORVU6Hr1G056160.1 Barley cytosol 50.42 64.87
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 63.48 64.68
Zm00001d002631_P003 Maize endoplasmic reticulum, golgi, mitochondrion, plastid 63.15 63.47
HORVU2Hr1G095160.7 Barley plastid 63.65 63.44
Bra037356.1-P Field mustard mitochondrion 73.37 63.29
KRH00647 Soybean cytosol 39.87 44.16
KRH70718 Soybean endoplasmic reticulum 42.38 41.68
KRG91450 Soybean mitochondrion 41.37 41.17
KRH74853 Soybean endoplasmic reticulum, golgi 41.54 40.86
KRH45909 Soybean endoplasmic reticulum 41.21 40.46
KRG99086 Soybean endoplasmic reticulum 41.04 40.3
KRH04297 Soybean endoplasmic reticulum 40.7 39.64
KRH39668 Soybean endoplasmic reticulum 39.53 39.53
KRH57576 Soybean endoplasmic reticulum 40.54 39.48
KRH01812 Soybean extracellular, plasma membrane, vacuole 37.86 39.3
KRH63351 Soybean endoplasmic reticulum 39.87 39.27
KRH76381 Soybean cytosol, golgi, plasma membrane 39.03 39.03
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 40.37 38.75
KRH60099 Soybean cytosol 40.37 38.68
KRH41379 Soybean cytosol 40.7 38.63
KRH07206 Soybean cytosol, golgi, plasma membrane 38.53 38.46
KRH09116 Soybean endoplasmic reticulum 40.7 38.45
KRG97692 Soybean plastid 24.79 38.34
KRH07708 Soybean cytosol 38.36 38.29
KRH48242 Soybean endoplasmic reticulum 40.87 38.07
KRH07208 Soybean cytosol 38.19 37.75
KRH54546 Soybean golgi 36.52 37.72
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 39.87 37.6
KRH73268 Soybean endoplasmic reticulum 37.19 37.31
KRH14916 Soybean nucleus 37.02 37.14
KRH31179 Soybean plasma membrane 36.52 36.7
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 38.19 36.19
KRH31698 Soybean endoplasmic reticulum 37.52 35.84
KRH19571 Soybean golgi 35.34 35.58
KRH34393 Soybean endoplasmic reticulum 36.85 35.43
KRH32196 Soybean golgi 35.01 35.3
KRH69085 Soybean endoplasmic reticulum, golgi 36.85 35.2
KRG92410 Soybean endoplasmic reticulum, golgi 36.35 35.0
KRH72067 Soybean plastid 35.18 34.83
KRH33118 Soybean extracellular, golgi, plastid 34.84 34.32
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 35.85 34.29
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 36.01 33.8
KRH16455 Soybean endoplasmic reticulum, golgi 36.68 33.18
KRH73069 Soybean endoplasmic reticulum 36.52 33.13
KRH15065 Soybean nucleus 36.68 32.98
KRH18054 Soybean endoplasmic reticulum, golgi 36.18 32.58
KRG97843 Soybean endoplasmic reticulum 35.18 31.67
KRH31030 Soybean endoplasmic reticulum, plasma membrane 35.18 31.34
KRH53915 Soybean endoplasmic reticulum 38.02 28.16
KRH64022 Soybean endoplasmic reticulum 38.19 28.15
KRH28732 Soybean endoplasmic reticulum 35.85 27.86
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 36.35 27.26
KRH69842 Soybean mitochondrion 36.68 26.51
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.85 26.38
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 36.52 26.23
KRH53330 Soybean endoplasmic reticulum 36.68 26.23
KRH05816 Soybean endoplasmic reticulum 30.15 25.75
KRH40943 Soybean golgi 36.18 25.65
KRH15210 Soybean mitochondrion 29.82 25.04
Protein Annotations
EntrezGene:100778824MapMan:21.3.1.1.2Gene3D:3.40.50.150EMBL:ACUP02001315EnsemblPlantsGene:GLYMA_03G016700GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:I1JKE2EnsemblPlants:KRH65147ProteinID:KRH65147ProteinID:KRH65147.1PFAM:PF03141
PANTHER:PTHR10108PANTHER:PTHR10108:SF763InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelix
UniParc:UPI000233A622SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:1683395..1688893
Molecular Weight (calculated)
67046.2 Da
IEP (calculated)
8.857
GRAVY (calculated)
-0.155
Length
597 amino acids
Sequence
(BLAST)
001: MGHVNLPASK RVRQWRVLDL VSAAFFGLVF LFFLLVFTPA GDSLAASGRQ TLLLSASSAD PRLRLRVSAA IEEAGQRQPR VIEACPADTA ADHMPCEDPR
101: LNSQLSREMN YYRERHCPPL ETTPLCLVPP LKGYKVPVKW PESLHKIWHS NMPYNKIADR KGHQGWMKLE GPHFIFPGGG TMFPDGAEQY IEKLGQYIPI
201: NGGVLRTALD MGCGVASFGG YLLAQNILTM SFAPRDSHKS QIQFALERGV PAFVAMLGTR RLPFPAFGFD LVHCSRCLIP FTAYNVSYFI EVDRLLRPGG
301: YLVISGPPVQ WPKQDKEWSD LQAVARALCY ELIAVDGNTV IWKKPAAEMC LPNQNEFGLD LCDDSDDPSF AWYFKLKKCV TRMSSVKGEY AIGTIPKWPE
401: RLTASPLRST VLKNGADVYE ADTKRWVRRV AHYKNSLKIK LGTSAVRNVM DMNAFFGGFA AALNSDPVWV MNVVPSHKPI TLDAIFDRGL IGVYHDWCEP
501: FSTYPRTYDL IHVASMESLV KDPASGRNRC TLLDLMVELD RILRPEGTVV VRDTPEVIEK VARVAHAVRW KPTIYNKEPE SHGREKILVA TKTFWKS
Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)
001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH
Arabidopsis Description
Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.