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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 4
  • extracellular 3
  • vacuole 3
  • plasma membrane 3
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG99086 Soybean endoplasmic reticulum 97.04 97.04
KRH74853 Soybean endoplasmic reticulum, golgi 86.84 86.99
KRH70718 Soybean endoplasmic reticulum 86.35 86.49
CDY50730 Canola cytosol 65.3 80.04
CDY46435 Canola endoplasmic reticulum, golgi 77.96 78.61
CDY16198 Canola endoplasmic reticulum, golgi 78.29 78.55
CDY40268 Canola endoplasmic reticulum, golgi 77.96 78.22
Bra024678.1-P Field mustard endoplasmic reticulum, golgi 78.78 78.01
PGSC0003DMT400080300 Potato endoplasmic reticulum, golgi 78.45 77.94
AT1G26850.2 Thale cress endoplasmic reticulum, golgi 78.95 77.92
Bra016293.1-P Field mustard endoplasmic reticulum, golgi 78.29 77.91
CDY45006 Canola endoplasmic reticulum, golgi 77.47 77.85
PGSC0003DMT400016774 Potato endoplasmic reticulum, golgi 78.29 77.78
Solyc05g007490.2.1 Tomato nucleus, plastid, unclear 78.12 77.61
Bra012437.1-P Field mustard endoplasmic reticulum, golgi 78.29 77.52
VIT_01s0026g02340.t01 Wine grape golgi 80.92 77.36
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 78.29 77.15
GSMUA_Achr3P01520_001 Banana endoplasmic reticulum, golgi 74.84 77.12
Solyc01g010870.2.1 Tomato nucleus, unclear 76.81 76.94
TraesCS5D01G234300.1 Wheat endoplasmic reticulum, golgi 76.81 76.06
TraesCS5B01G225500.1 Wheat cytosol, endoplasmic reticulum, golgi 76.64 75.9
GSMUA_Achr3P20050_001 Banana endoplasmic reticulum, golgi 73.52 75.76
TraesCS5A01G226900.1 Wheat golgi 76.48 75.73
HORVU5Hr1G065680.2 Barley cytosol, endoplasmic reticulum, golgi 76.15 75.41
Zm00001d020461_P001 Maize plasma membrane 75.0 74.15
EER96732 Sorghum endoplasmic reticulum, golgi 75.33 74.11
Os09t0415700-01 Rice golgi 75.0 74.03
HORVU5Hr1G102720.2 Barley cytosol 62.01 73.78
GSMUA_Achr8P16940_001 Banana endoplasmic reticulum, golgi 43.26 73.67
KRH63351 Soybean endoplasmic reticulum 71.38 71.62
TraesCS5D01G429900.1 Wheat endoplasmic reticulum, golgi, vacuole 70.56 70.1
KRH57576 Soybean endoplasmic reticulum 70.23 69.66
KRH54546 Soybean golgi 66.12 69.55
KRH04297 Soybean endoplasmic reticulum 70.07 69.49
Os03t0379100-01 Rice endoplasmic reticulum, golgi, vacuole 69.41 69.07
TraesCS5A01G421600.2 Wheat endoplasmic reticulum 70.39 68.92
TraesCS5B01G423200.2 Wheat cytosol, endoplasmic reticulum, golgi, mitochondrion 70.39 68.92
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 68.09 67.87
Zm00001d029336_P002 Maize cytosol 68.26 60.41
KRH00647 Soybean cytosol 51.97 58.63
Zm00001d047183_P002 Maize golgi 58.72 57.21
KRG91450 Soybean mitochondrion 53.29 54.0
KRH09116 Soybean endoplasmic reticulum 56.09 53.96
KRH60099 Soybean cytosol 54.77 53.45
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 55.43 53.24
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 53.95 52.73
KRH41379 Soybean cytosol 54.28 52.46
KRH48242 Soybean endoplasmic reticulum 52.3 49.61
KRH01812 Soybean extracellular, plasma membrane, vacuole 46.22 48.87
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 46.05 44.44
KRH39668 Soybean endoplasmic reticulum 42.11 42.88
KRH76381 Soybean cytosol, golgi, plasma membrane 41.78 42.55
KRH07206 Soybean cytosol, golgi, plasma membrane 41.78 42.47
KRH40535 Soybean plastid 41.45 42.21
KRH07708 Soybean cytosol 41.12 41.81
KRH00643 Soybean endoplasmic reticulum, mitochondrion 40.95 41.78
KRH07208 Soybean cytosol 41.45 41.72
KRH48238 Soybean endoplasmic reticulum 40.46 41.41
KRH65147 Soybean endoplasmic reticulum 40.46 41.21
KRH19571 Soybean golgi 37.99 38.95
KRH32196 Soybean golgi 37.66 38.68
KRH69085 Soybean endoplasmic reticulum, golgi 39.14 38.08
KRH34393 Soybean endoplasmic reticulum 38.65 37.84
KRH31698 Soybean endoplasmic reticulum 38.82 37.76
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 38.65 37.66
KRG92410 Soybean endoplasmic reticulum, golgi 38.32 37.58
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 38.16 36.48
KRH16455 Soybean endoplasmic reticulum, golgi 39.14 36.06
KRH18054 Soybean endoplasmic reticulum, golgi 39.31 36.05
KRG97692 Soybean plastid 22.7 35.75
KRH73268 Soybean endoplasmic reticulum 34.87 35.63
KRG97843 Soybean endoplasmic reticulum 38.65 35.44
KRH73069 Soybean endoplasmic reticulum 38.16 35.26
KRH14916 Soybean nucleus 34.38 35.13
KRH31179 Soybean plasma membrane 34.05 34.85
KRH15065 Soybean nucleus 37.99 34.79
KRH31030 Soybean endoplasmic reticulum, plasma membrane 38.32 34.78
KRH72067 Soybean plastid 32.73 33.0
KRH33118 Soybean extracellular, golgi, plastid 32.24 32.34
KRH28732 Soybean endoplasmic reticulum 36.35 28.78
KRH53915 Soybean endoplasmic reticulum 37.83 28.54
KRH64022 Soybean endoplasmic reticulum 37.83 28.4
KRH69842 Soybean mitochondrion 38.16 28.09
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 36.35 27.76
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 37.83 27.68
KRH40943 Soybean golgi 37.66 27.2
KRH53330 Soybean endoplasmic reticulum 36.84 26.83
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.51 26.62
KRH05816 Soybean endoplasmic reticulum 29.44 25.61
KRH15210 Soybean mitochondrion 29.28 25.04
Protein Annotations
EntrezGene:100796104Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02005295ncoils:CoilEnsemblPlantsGene:GLYMA_08G300700
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0032259UniProt:I1KXT4ProteinID:KRH45907.1ProteinID:KRH45908.1EnsemblPlants:KRH45909
ProteinID:KRH45909ProteinID:KRH45909.1PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1061InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI000233887ESEG:seg:
Description
hypothetical protein
Coordinates
chr8:-:41876221..41881324
Molecular Weight (calculated)
68742.1 Da
IEP (calculated)
7.878
GRAVY (calculated)
-0.404
Length
608 amino acids
Sequence
(BLAST)
001: MAKPSSADGR TRSSVQIFIV VGLCCFFYIL GAWQRSGFGK GDSIALEITK TNTECNIVPN LSFDSHHGGE VNEFDEADSK PKVFEPCAAR YTDYTPCQDQ
101: KRAMTFPREN MVYRERHCPP EEEKLQCMIP APKGYVTPFP WPKSRDYVPY ANAPYKSLTV EKAIQNWIQY EGNVFKFPGG GTQFPQGADK YIDQIASVIP
201: ITNGTVRTAL DTGCGVASWG AYLWSRNVIA MSFAPRDNHE AQVQFALERG VPAIVGVLGS IKLPYPSRAF DMAHCSRCLI PWGANNGIYM MEVDRVLRPG
301: GYWVLSGPPI NWKANYKSWL RPKEELEEEQ RKIEETAKQL CWEKRSEKAE MAIWQKVVDS ESCQRRKDDS SVEFCESSDA DDVWYKKMEA CITPTPKVTG
401: GNLKPFPSRL YAIPPRIASG LVPGVSSETY QDDNKKWKKH VKAYKKTNRL LDSGRYRNIM DMNAGLGSFA AAIHSSKLWV MNVVPTIAEA NTLGVIYERG
501: LIGIYHDWCE AFSTYPRTYD LIHAHGVFSL YKDKCKAEDI LLEMDRILRP EGAVIFRDEV DVLIKVKKIV GGMRWDTKMV DHEDGPLVPE KVLVAVKQYW
601: VTNSTSTQ
Best Arabidopsis Sequence Match ( AT1G26850.1 )
(BLAST)
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.