Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra024072.1-P | Field mustard | cytosol | 78.44 | 99.75 |
CDX72246 | Canola | mitochondrion | 97.41 | 97.8 |
AT4G30490.1 | Thale cress | mitochondrion | 86.83 | 87.53 |
CDX89206 | Canola | mitochondrion | 65.87 | 69.33 |
CDY19007 | Canola | mitochondrion | 65.87 | 69.33 |
VIT_11s0037g00990.t01 | Wine grape | mitochondrion | 66.47 | 66.07 |
PGSC0003DMT400029004 | Potato | mitochondrion | 66.27 | 66.0 |
Solyc07g006160.2.1 | Tomato | mitochondrion | 66.07 | 65.81 |
KRH72370 | Soybean | mitochondrion | 65.47 | 65.47 |
KRH02973 | Soybean | mitochondrion | 64.27 | 64.02 |
GSMUA_Achr3P28020_001 | Banana | mitochondrion | 62.28 | 63.93 |
TraesCS1A01G372400.2 | Wheat | mitochondrion | 61.48 | 61.11 |
GSMUA_Achr1P10190_001 | Banana | mitochondrion | 62.08 | 60.74 |
KXG26754 | Sorghum | plastid | 61.08 | 60.12 |
Zm00001d025892_P003 | Maize | mitochondrion, plastid | 60.88 | 59.92 |
TraesCS1B01G392400.1 | Wheat | mitochondrion | 60.68 | 59.73 |
Zm00001d002967_P005 | Maize | mitochondrion | 60.08 | 59.72 |
HORVU1Hr1G082690.6 | Barley | mitochondrion | 60.28 | 59.68 |
TraesCS1D01G379000.4 | Wheat | mitochondrion | 59.88 | 58.94 |
EES13629 | Sorghum | plastid | 59.48 | 58.55 |
Os08t0265500-01 | Rice | mitochondrion | 15.17 | 41.99 |
CDY11525 | Canola | mitochondrion | 27.54 | 23.63 |
CDX76756 | Canola | mitochondrion | 27.54 | 23.63 |
Protein Annotations
EnsemblPlants:CDY39208 | EnsemblPlantsGene:GSBRNA2T00067426001 | Gene3D:3.40.50.300 | GO:A0A078HR12 | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005524 | InterPro:ATPase_AFG1-like | InterPro:P-loop_NTPase | PANTHER:PTHR12169 | PANTHER:PTHR12169:SF6 |
PFAM:PF03969 | ProteinID:CDY39208 | ProteinID:CDY39208.1 | SEG:seg | SUPFAM:SSF52540 | UniParc:UPI0004EF2065 |
UniProt:A0A078HR12 | MapMan:35.2 | : | : | : | : |
Description
BnaA03g50200DBnaA03g50200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR12]
Coordinates
chrLK032443:-:144411..147473
Molecular Weight (calculated)
56353.7 Da
IEP (calculated)
8.463
GRAVY (calculated)
-0.219
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPVFRSSSS LSRIRWALRN QERYNSSTFS SKSRKLLIGA NQNEALVNTN TCNSTLHSRL SFSRGLSAEA VEAADAAIKL TVSSSADVNR TGPLVEYERR
101: ISDGELMTGD ICQLGALKEL QRLHDQLVES VDTCRLDRYN TSDKSSSRSR WFWSRIMPQS SVSPVKGLYL YGGVGTGKTM LMDLFFDQLP CTWKKQRIHF
201: HDFMLTVHSR LQKHKGLSDP LEVVAQEIAH DAILLCLDEF MVTDVADALI LNRLFGHLFS NGIILVATSN RNPDKLYEGG LQRDLFLPFI ASLKERNVVH
301: EIGSAVDYRK LTSAEQGFYF IGTDLSTLLK QKFQELIGGN VVARPQVVEV VMGRKLQVPL GAKGCAYFPF EELCDRPLGA ADYFGLFKKF HTLALEGVPV
401: FGLHNRTAAY RFVTLVDVMY ENRARLLCTA EATPQELLEK IVTISDAKSM SPRTSSRSRK NDVSELCVDN ELGFAKDRTI SRLTEMNSKE YLEQHAITHN
501: L
101: ISDGELMTGD ICQLGALKEL QRLHDQLVES VDTCRLDRYN TSDKSSSRSR WFWSRIMPQS SVSPVKGLYL YGGVGTGKTM LMDLFFDQLP CTWKKQRIHF
201: HDFMLTVHSR LQKHKGLSDP LEVVAQEIAH DAILLCLDEF MVTDVADALI LNRLFGHLFS NGIILVATSN RNPDKLYEGG LQRDLFLPFI ASLKERNVVH
301: EIGSAVDYRK LTSAEQGFYF IGTDLSTLLK QKFQELIGGN VVARPQVVEV VMGRKLQVPL GAKGCAYFPF EELCDRPLGA ADYFGLFKKF HTLALEGVPV
401: FGLHNRTAAY RFVTLVDVMY ENRARLLCTA EATPQELLEK IVTISDAKSM SPRTSSRSRK NDVSELCVDN ELGFAKDRTI SRLTEMNSKE YLEQHAITHN
501: L
001: MRPIIRLSSL SRIRWALRNN QERYSSTFYS KSRKLLIGVN QNQALLNTNT DNSSLYSRSS IFRGLSAEAV EAADPATTRV TVSDVNRTGP LVEYERRISN
101: GELMTGDICQ ISALRELQRL YDELVDSVDT CRLDRYNTSD KSSRSRWFWS RLMPQTSYSP VKGLYLYGGV GTGKTMLMDL FFDQLPCTWK KQRIHFHDFM
201: LSVHSRLQKH KGLSDPLEVV AQEIAHDAIL LCLDEFMVTD VADALILNRL FGHLFSNGVI LVATSNRNPD KLYEGGLQRD LFLPFISSLK ERSVVHEIGS
301: AVDYRKLTSA EQGFYFIGKD LSTLLKQKFR QLIGDNVVAR PQVVEVVMGR KLQIPLGANG CAYFPFEELC DRPLGAADYF GLFKKFHTLA LDEIPVFGLH
401: NRTAAYRFVT LVDVMYENRA RLLCTAEANP QELLEKIITI SEAKSMGPRT SSRSRKNDVT ELCVDNELGF AKDRTISRLT EMNSKEYLEH HAITHNL
101: GELMTGDICQ ISALRELQRL YDELVDSVDT CRLDRYNTSD KSSRSRWFWS RLMPQTSYSP VKGLYLYGGV GTGKTMLMDL FFDQLPCTWK KQRIHFHDFM
201: LSVHSRLQKH KGLSDPLEVV AQEIAHDAIL LCLDEFMVTD VADALILNRL FGHLFSNGVI LVATSNRNPD KLYEGGLQRD LFLPFISSLK ERSVVHEIGS
301: AVDYRKLTSA EQGFYFIGKD LSTLLKQKFR QLIGDNVVAR PQVVEVVMGR KLQIPLGANG CAYFPFEELC DRPLGAADYF GLFKKFHTLA LDEIPVFGLH
401: NRTAAYRFVT LVDVMYENRA RLLCTAEANP QELLEKIITI SEAKSMGPRT SSRSRKNDVT ELCVDNELGF AKDRTISRLT EMNSKEYLEH HAITHNL
Arabidopsis Description
AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L517]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.