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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 7
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024072.1-P Field mustard cytosol 78.44 99.75
CDX72246 Canola mitochondrion 97.41 97.8
AT4G30490.1 Thale cress mitochondrion 86.83 87.53
CDX89206 Canola mitochondrion 65.87 69.33
CDY19007 Canola mitochondrion 65.87 69.33
VIT_11s0037g00990.t01 Wine grape mitochondrion 66.47 66.07
PGSC0003DMT400029004 Potato mitochondrion 66.27 66.0
Solyc07g006160.2.1 Tomato mitochondrion 66.07 65.81
KRH72370 Soybean mitochondrion 65.47 65.47
KRH02973 Soybean mitochondrion 64.27 64.02
GSMUA_Achr3P28020_001 Banana mitochondrion 62.28 63.93
TraesCS1A01G372400.2 Wheat mitochondrion 61.48 61.11
GSMUA_Achr1P10190_001 Banana mitochondrion 62.08 60.74
KXG26754 Sorghum plastid 61.08 60.12
Zm00001d025892_P003 Maize mitochondrion, plastid 60.88 59.92
TraesCS1B01G392400.1 Wheat mitochondrion 60.68 59.73
Zm00001d002967_P005 Maize mitochondrion 60.08 59.72
HORVU1Hr1G082690.6 Barley mitochondrion 60.28 59.68
TraesCS1D01G379000.4 Wheat mitochondrion 59.88 58.94
EES13629 Sorghum plastid 59.48 58.55
Os08t0265500-01 Rice mitochondrion 15.17 41.99
CDY11525 Canola mitochondrion 27.54 23.63
CDX76756 Canola mitochondrion 27.54 23.63
Protein Annotations
EnsemblPlants:CDY39208EnsemblPlantsGene:GSBRNA2T00067426001Gene3D:3.40.50.300GO:A0A078HR12GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005524InterPro:ATPase_AFG1-likeInterPro:P-loop_NTPasePANTHER:PTHR12169PANTHER:PTHR12169:SF6
PFAM:PF03969ProteinID:CDY39208ProteinID:CDY39208.1SEG:segSUPFAM:SSF52540UniParc:UPI0004EF2065
UniProt:A0A078HR12MapMan:35.2::::
Description
BnaA03g50200DBnaA03g50200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR12]
Coordinates
chrLK032443:-:144411..147473
Molecular Weight (calculated)
56353.7 Da
IEP (calculated)
8.463
GRAVY (calculated)
-0.219
Length
501 amino acids
Sequence
(BLAST)
001: MRPVFRSSSS LSRIRWALRN QERYNSSTFS SKSRKLLIGA NQNEALVNTN TCNSTLHSRL SFSRGLSAEA VEAADAAIKL TVSSSADVNR TGPLVEYERR
101: ISDGELMTGD ICQLGALKEL QRLHDQLVES VDTCRLDRYN TSDKSSSRSR WFWSRIMPQS SVSPVKGLYL YGGVGTGKTM LMDLFFDQLP CTWKKQRIHF
201: HDFMLTVHSR LQKHKGLSDP LEVVAQEIAH DAILLCLDEF MVTDVADALI LNRLFGHLFS NGIILVATSN RNPDKLYEGG LQRDLFLPFI ASLKERNVVH
301: EIGSAVDYRK LTSAEQGFYF IGTDLSTLLK QKFQELIGGN VVARPQVVEV VMGRKLQVPL GAKGCAYFPF EELCDRPLGA ADYFGLFKKF HTLALEGVPV
401: FGLHNRTAAY RFVTLVDVMY ENRARLLCTA EATPQELLEK IVTISDAKSM SPRTSSRSRK NDVSELCVDN ELGFAKDRTI SRLTEMNSKE YLEQHAITHN
501: L
Best Arabidopsis Sequence Match ( AT4G30490.1 )
(BLAST)
001: MRPIIRLSSL SRIRWALRNN QERYSSTFYS KSRKLLIGVN QNQALLNTNT DNSSLYSRSS IFRGLSAEAV EAADPATTRV TVSDVNRTGP LVEYERRISN
101: GELMTGDICQ ISALRELQRL YDELVDSVDT CRLDRYNTSD KSSRSRWFWS RLMPQTSYSP VKGLYLYGGV GTGKTMLMDL FFDQLPCTWK KQRIHFHDFM
201: LSVHSRLQKH KGLSDPLEVV AQEIAHDAIL LCLDEFMVTD VADALILNRL FGHLFSNGVI LVATSNRNPD KLYEGGLQRD LFLPFISSLK ERSVVHEIGS
301: AVDYRKLTSA EQGFYFIGKD LSTLLKQKFR QLIGDNVVAR PQVVEVVMGR KLQIPLGANG CAYFPFEELC DRPLGAADYF GLFKKFHTLA LDEIPVFGLH
401: NRTAAYRFVT LVDVMYENRA RLLCTAEANP QELLEKIITI SEAKSMGPRT SSRSRKNDVT ELCVDNELGF AKDRTISRLT EMNSKEYLEH HAITHNL
Arabidopsis Description
AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L517]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.