CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89206	Canola	mitochondrion	99.79	99.79
Bra026286.1-P	Field mustard	mitochondrion	97.27	97.68
AT4G28070.2	Thale cress	mitochondrion	88.03	88.58
VIT_11s0037g00990.t01	Wine grape	mitochondrion	72.06	68.06
PGSC0003DMT400029004	Potato	mitochondrion	69.96	66.2
Solyc07g006160.2.1	Tomato	mitochondrion	69.75	66.0
CDY39208	Canola	mitochondrion	69.33	65.87
CDX72246	Canola	mitochondrion	68.7	65.53
KRH72370	Soybean	mitochondrion	67.86	64.47
GSMUA_Achr3P28020_001	Banana	mitochondrion	65.97	64.34
KRH02973	Soybean	mitochondrion	67.65	64.02
GSMUA_Achr1P10190_001	Banana	mitochondrion	68.07	63.28
TraesCS1A01G372400.2	Wheat	mitochondrion	63.66	60.12
Zm00001d025892_P003	Maize	mitochondrion, plastid	63.24	59.14
KXG26754	Sorghum	plastid	62.82	58.74
TraesCS1B01G392400.1	Wheat	mitochondrion	62.82	58.74
HORVU1Hr1G082690.6	Barley	mitochondrion	62.4	58.7
TraesCS1D01G379000.4	Wheat	mitochondrion	62.6	58.55
Zm00001d002967_P005	Maize	mitochondrion	61.97	58.53
EES13629	Sorghum	plastid	61.13	57.17
Os08t0265500-01	Rice	mitochondrion	14.92	39.23
CDY11525	Canola	mitochondrion	28.57	23.29
CDX76756	Canola	mitochondrion	28.36	23.12

Protein Annotations

EnsemblPlants:CDY19007	EnsemblPlantsGene:GSBRNA2T00006251001	Gene3D:3.40.50.300	GO:A0A078G1Z0	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AFG1-like	InterPro:P-loop_NTPase	PANTHER:PTHR12169	PANTHER:PTHR12169:SF6
PFAM:PF03969	ProteinID:CDY19007	ProteinID:CDY19007.1	SUPFAM:SSF52540	UniParc:UPI0004EF1E02	UniProt:A0A078G1Z0
MapMan:35.2	:	:	:	:	:

Description

BnaC01g20610DBnaC01g20610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1Z0]

Coordinates

chrLK032091:-:277835..280531

Molecular Weight (calculated)

53746.7 Da

IEP (calculated)

7.086

GRAVY (calculated)

-0.164

Length

476 amino acids

Sequence
(BLAST)

001: MRSLLFSLRR VTLLSRHHHQ QPHAFAPIRT RSIPINPTSS FPYLLRHSSS SSHPNGDDAK VAGPLVEYER RIVAGELLDG DLCQLGTLRE LQRLYDELVQ
101: SADACRLDRY SASAKPTRSN WFWNKFVSPH SSVSPVKGLY LYGGVGTGKT MLMDLFFHQL PSSWRAQRIH FHNFMLSVHS RLQMHKGLED PLEVVGLEIA
201: DEAILLCLDE FMVNDVADAL ILNRLFRHLF NNGIVLVATS NRAPDNLYER GLQRDLFLPF IAALKERCVV REIGSSVDYR KLTSAEEGFY FIGRDISGLL
301: KQKFQQLVGD EPAGPQVVEV VMGRKLQVPL AADGCAYFLF EELCDRPLGA ADYLGLFKKF HTLALEGVPM FGLHNRTAAY RFVTLVDVMY ETKARLLCTA
401: EGSPLELLES IVTIADAQQI APRTSSRSRK SDDIDLCVDN ELGFAKDRTI SRLTEMNSKE YLEQHSTMLQ EKQPSL

Best Arabidopsis Sequence Match ( AT4G28070.2 )
(BLAST)

001: MRLLLLSLRR VTLFSRHQRY AFAPIHNCLI SINPSTSSSS LFSASSFCSS PHSNGDGKIA GPLVEYERRI VAGELLDGDL CQLGTLRELQ RLYDELVQSA
101: DACRLDRYSA SAKSTRSNWF WNKFVSHSSV SPVKGLYLYG GVGTGKTMLM DLFFHQLPAS WRTQRIHFHN FMLSVHSRLQ KHKGLEDPLE VVGLEIADEA
201: ILLCLDEFMV NDVADALILN RLFRHLFNNG IILVATSNRA PDNLYEGGLQ RDLFLPFIST LKERCVVREI GSSVDYRKLT SAEEGFYFIG KDISGLLKQK
301: FQLLVGDQPA GPQVVEVVMG RKLQVPLAAD GCAYFLFEEL CDRPLGAADY LGLFKKFHTL ALEGVPFFGL HNRTAAYRFV TLVDVMYENK ARLLCTAEGS
401: PLELLERIVT ISDAQQIAPR TSSRSRKSDD PDLCVDNELG FAKDRTISRL TEMNSKEYLE QHSRMLQEKQ PSS

Arabidopsis Description

AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q5XET7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.