Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026286.1-P | Field mustard | mitochondrion | 89.01 | 88.82 |
| CDX89206 | Canola | mitochondrion | 88.79 | 88.24 |
| CDY19007 | Canola | mitochondrion | 88.58 | 88.03 |
| VIT_11s0037g00990.t01 | Wine grape | mitochondrion | 73.15 | 68.65 |
| PGSC0003DMT400029004 | Potato | mitochondrion | 71.04 | 66.8 |
| Solyc07g006160.2.1 | Tomato | mitochondrion | 70.82 | 66.6 |
| AT4G30490.1 | Thale cress | mitochondrion | 69.98 | 66.6 |
| GSMUA_Achr3P28020_001 | Banana | mitochondrion | 67.02 | 64.96 |
| KRH72370 | Soybean | mitochondrion | 67.65 | 63.87 |
| KRH02973 | Soybean | mitochondrion | 67.44 | 63.42 |
| GSMUA_Achr1P10190_001 | Banana | mitochondrion | 67.86 | 62.7 |
| TraesCS1A01G372400.2 | Wheat | mitochondrion | 65.12 | 61.11 |
| TraesCS1B01G392400.1 | Wheat | mitochondrion | 64.27 | 59.73 |
| HORVU1Hr1G082690.6 | Barley | mitochondrion | 63.85 | 59.68 |
| Zm00001d025892_P003 | Maize | mitochondrion, plastid | 63.85 | 59.33 |
| KXG26754 | Sorghum | plastid | 63.42 | 58.94 |
| TraesCS1D01G379000.4 | Wheat | mitochondrion | 63.42 | 58.94 |
| Zm00001d002967_P005 | Maize | mitochondrion | 62.58 | 58.73 |
| EES13629 | Sorghum | plastid | 62.58 | 58.15 |
| Os08t0265500-01 | Rice | mitochondrion | 15.01 | 39.23 |
| AT2G25530.1 | Thale cress | cytosol, nucleus, vacuole | 28.33 | 20.46 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.2 | EntrezGene:828922 | ProteinID:AEE85435.1 | ArrayExpress:AT4G28070 | EnsemblPlantsGene:AT4G28070 |
| RefSeq:AT4G28070 | TAIR:AT4G28070 | RefSeq:AT4G28070-TAIR-G | EnsemblPlants:AT4G28070.2 | TAIR:AT4G28070.2 | InterPro:ATPase_AFG1-like |
| EMBL:BT015879 | EMBL:BT020434 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | RefSeq:NP_001031737.1 | InterPro:P-loop_NTPase | PFAM:PF03969 | PO:PO:0000293 | PANTHER:PTHR12169 |
| PANTHER:PTHR12169:SF6 | UniProt:Q5XET7 | SUPFAM:SSF52540 | UniParc:UPI000044D409 | SEG:seg | : |
Description
AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q5XET7]
Coordinates
chr4:+:13945918..13948627
Molecular Weight (calculated)
53248.1 Da
IEP (calculated)
7.327
GRAVY (calculated)
-0.127
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLLLLSLRR VTLFSRHQRY AFAPIHNCLI SINPSTSSSS LFSASSFCSS PHSNGDGKIA GPLVEYERRI VAGELLDGDL CQLGTLRELQ RLYDELVQSA
101: DACRLDRYSA SAKSTRSNWF WNKFVSHSSV SPVKGLYLYG GVGTGKTMLM DLFFHQLPAS WRTQRIHFHN FMLSVHSRLQ KHKGLEDPLE VVGLEIADEA
201: ILLCLDEFMV NDVADALILN RLFRHLFNNG IILVATSNRA PDNLYEGGLQ RDLFLPFIST LKERCVVREI GSSVDYRKLT SAEEGFYFIG KDISGLLKQK
301: FQLLVGDQPA GPQVVEVVMG RKLQVPLAAD GCAYFLFEEL CDRPLGAADY LGLFKKFHTL ALEGVPFFGL HNRTAAYRFV TLVDVMYENK ARLLCTAEGS
401: PLELLERIVT ISDAQQIAPR TSSRSRKSDD PDLCVDNELG FAKDRTISRL TEMNSKEYLE QHSRMLQEKQ PSS
101: DACRLDRYSA SAKSTRSNWF WNKFVSHSSV SPVKGLYLYG GVGTGKTMLM DLFFHQLPAS WRTQRIHFHN FMLSVHSRLQ KHKGLEDPLE VVGLEIADEA
201: ILLCLDEFMV NDVADALILN RLFRHLFNNG IILVATSNRA PDNLYEGGLQ RDLFLPFIST LKERCVVREI GSSVDYRKLT SAEEGFYFIG KDISGLLKQK
301: FQLLVGDQPA GPQVVEVVMG RKLQVPLAAD GCAYFLFEEL CDRPLGAADY LGLFKKFHTL ALEGVPFFGL HNRTAAYRFV TLVDVMYENK ARLLCTAEGS
401: PLELLERIVT ISDAQQIAPR TSSRSRKSDD PDLCVDNELG FAKDRTISRL TEMNSKEYLE QHSRMLQEKQ PSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.