Factsheet for Bra026286.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19007	Canola	mitochondrion	97.68	97.27
CDX89206	Canola	mitochondrion	97.47	97.06
AT4G28070.2	Thale cress	mitochondrion	88.82	89.01
Bra024072.1-P	Field mustard	cytosol	65.19	78.43
VIT_11s0037g00990.t01	Wine grape	mitochondrion	72.15	67.86
PGSC0003DMT400029004	Potato	mitochondrion	70.25	66.2
Solyc07g006160.2.1	Tomato	mitochondrion	70.04	66.0
KRH72370	Soybean	mitochondrion	68.35	64.67
GSMUA_Achr3P28020_001	Banana	mitochondrion	66.46	64.55
KRH02973	Soybean	mitochondrion	68.14	64.21
GSMUA_Achr1P10190_001	Banana	mitochondrion	68.35	63.28
TraesCS1A01G372400.2	Wheat	mitochondrion	63.92	60.12
Zm00001d025892_P003	Maize	mitochondrion, plastid	63.29	58.94
TraesCS1B01G392400.1	Wheat	mitochondrion	63.08	58.74
HORVU1Hr1G082690.6	Barley	mitochondrion	62.66	58.7
KXG26754	Sorghum	plastid	62.87	58.55
TraesCS1D01G379000.4	Wheat	mitochondrion	62.66	58.35
Zm00001d002967_P005	Maize	mitochondrion	62.03	58.33
EES13629	Sorghum	plastid	61.18	56.97
Os08t0265500-01	Rice	mitochondrion	14.98	39.23
Bra007794.1-P	Field mustard	mitochondrion	28.48	23.12

Protein Annotations

EnsemblPlants:Bra026286.1	EnsemblPlants:Bra026286.1-P	EnsemblPlantsGene:Bra026286	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AFG1-like	InterPro:P-loop_NTPase	PANTHER:PTHR12169	PANTHER:PTHR12169:SF6
PFAM:PF03969	SUPFAM:SSF52540	UniParc:UPI0002543F30	UniProt:M4EBX7	MapMan:35.2	:

Description

AT4G28070 (E=3e-244) | AFG1-like ATPase family protein

Coordinates

chrA01:+:10220964..10223363

Molecular Weight (calculated)

53543.5 Da

IEP (calculated)

6.915

GRAVY (calculated)

-0.146

Length

474 amino acids

Sequence
(BLAST)

001: MRSLLFSLRR VTLLSRHHQP YAFSPIRNHL IPINPTSSFP YLLRHSSSSS HPNGDDAKVA GPLVEYERRI VAGELLDGDL CQLGTLRELQ RLYDELVQSA
101: DACRLDRYSA SAKPTRSNWF WNKFVSPHSS VSPVKGLYLY GGVGTGKTML MDLFFHQLPS SWRAQRIHFH NFMLSVHSRL QMHKGLEDPL EVVGLEIADE
201: AILLCLDEFM VNDVADALIL NRLFRHLFNN GIVLVATSNR APDNLYERGL QRDLFLPFIA ALKERCVVRE IGSSVDYRKL TSAEEGFYFI GRDISGLLKQ
301: KFQQLVGDEP AGPQVVEVVM GRKLQVPLAA DGCAYFLFEE LCDRPLGAAD YLGLFKKFHT LALEGVPMFG LHNRTAAYRF VTLVDVMYET KARLLCTAEG
401: SPLELLESIV TIADAQQIAP RTSSRSRKSD DIDLCVDNEL GFAKDRTISR LTEMNSKEYL EQHSTMLQEK QPSL

Best Arabidopsis Sequence Match ( AT4G28070.2 )
(BLAST)

001: MRLLLLSLRR VTLFSRHQRY AFAPIHNCLI SINPSTSSSS LFSASSFCSS PHSNGDGKIA GPLVEYERRI VAGELLDGDL CQLGTLRELQ RLYDELVQSA
101: DACRLDRYSA SAKSTRSNWF WNKFVSHSSV SPVKGLYLYG GVGTGKTMLM DLFFHQLPAS WRTQRIHFHN FMLSVHSRLQ KHKGLEDPLE VVGLEIADEA
201: ILLCLDEFMV NDVADALILN RLFRHLFNNG IILVATSNRA PDNLYEGGLQ RDLFLPFIST LKERCVVREI GSSVDYRKLT SAEEGFYFIG KDISGLLKQK
301: FQLLVGDQPA GPQVVEVVMG RKLQVPLAAD GCAYFLFEEL CDRPLGAADY LGLFKKFHTL ALEGVPFFGL HNRTAAYRFV TLVDVMYENK ARLLCTAEGS
401: PLELLERIVT ISDAQQIAPR TSSRSRKSDD PDLCVDNELG FAKDRTISRL TEMNSKEYLE QHSRMLQEKQ PSS

Arabidopsis Description

AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q5XET7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.