Factsheet for Os08t0265500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 3

Predictors

GFP

MS/MS

Papers

mitochondrion: 23257241
plastid: 23257241

gfp PMID: 23257241 doi

L Xu, C Carrie, SR Law, MW Murcha, J Whelan

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0763750-01
Os02t0708400-01
Os04t0641400-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G30490.1	Os04t0641400-02	AT1G14340.1	21798944
AT4G30490.1	Os02t0708400-01	AT3G27960.1	21798944
AT4G30490.1	Os01t0763750-01	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G372400.2	Wheat	mitochondrion	77.35	27.78
Zm00001d002967_P005	Maize	mitochondrion	76.8	27.58
HORVU1Hr1G082690.6	Barley	mitochondrion	76.24	27.27
KXG26754	Sorghum	plastid	76.24	27.11
TraesCS1B01G392400.1	Wheat	mitochondrion	75.69	26.92
TraesCS1D01G379000.4	Wheat	mitochondrion	75.14	26.72
EES13629	Sorghum	plastid	74.03	26.33
Zm00001d025892_P003	Maize	mitochondrion, plastid	71.27	25.34
GSMUA_Achr1P10190_001	Banana	mitochondrion	52.49	18.55
GSMUA_Achr3P28020_001	Banana	mitochondrion	46.96	17.42
VIT_11s0037g00990.t01	Wine grape	mitochondrion	46.41	16.67
KRH02973	Soybean	mitochondrion	45.3	16.3
KRH72370	Soybean	mitochondrion	44.75	16.17
PGSC0003DMT400029004	Potato	mitochondrion	44.75	16.1
Solyc07g006160.2.1	Tomato	mitochondrion	44.2	15.9
CDX72246	Canola	mitochondrion	41.99	15.23
CDY39208	Canola	mitochondrion	41.99	15.17
AT4G28070.2	Thale cress	mitochondrion	39.23	15.01
Bra026286.1-P	Field mustard	mitochondrion	39.23	14.98
CDY19007	Canola	mitochondrion	39.23	14.92
CDX89206	Canola	mitochondrion	39.23	14.92
AT4G30490.1	Thale cress	mitochondrion	40.88	14.89
Bra024072.1-P	Field mustard	cytosol	26.52	12.18
Os03t0851900-01	Rice	plasma membrane	18.78	5.55

Protein Annotations

EnsemblPlants:Os08t0265500-01	EnsemblPlantsGene:Os08g0265500	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:ATPase_AFG1-like	PANTHER:PTHR12169	PANTHER:PTHR12169:SF6	PFAM:PF03969	ProteinID:BAT04621.1
SEG:seg	UniParc:UPI000393C26C	UniProt:A0A0P0XDP0	MapMan:35.2	:	:

Description

Similar to ATPase. (Os08t0265500-01)

Coordinates

chr8:+:10097893..10103955

Molecular Weight (calculated)

20667.6 Da

IEP (calculated)

8.606

GRAVY (calculated)

-0.453

Length

181 amino acids

Sequence
(BLAST)

001: MRSVVRSLRQ LRRFGQLHAE RHSSTNRLIK QQNALVLCSS ASSSMSTLCC NREIGRYVSP SVEILRSSFS TVAADSIKDV ARGGPMVEYE RRIASGELVD
101: GDNFQIDTIQ HLQRLYEELV ENEEACQLDR YQSSEKSGRR RWLWSRLITQ PSTYSPVQGL YMYGGVGTGK TMLMDLFYEQ L

Best Arabidopsis Sequence Match ( AT4G30490.1 )
(BLAST)

001: MRPIIRLSSL SRIRWALRNN QERYSSTFYS KSRKLLIGVN QNQALLNTNT DNSSLYSRSS IFRGLSAEAV EAADPATTRV TVSDVNRTGP LVEYERRISN
101: GELMTGDICQ ISALRELQRL YDELVDSVDT CRLDRYNTSD KSSRSRWFWS RLMPQTSYSP VKGLYLYGGV GTGKTMLMDL FFDQLPCTWK KQRIHFHDFM
201: LSVHSRLQKH KGLSDPLEVV AQEIAHDAIL LCLDEFMVTD VADALILNRL FGHLFSNGVI LVATSNRNPD KLYEGGLQRD LFLPFISSLK ERSVVHEIGS
301: AVDYRKLTSA EQGFYFIGKD LSTLLKQKFR QLIGDNVVAR PQVVEVVMGR KLQIPLGANG CAYFPFEELC DRPLGAADYF GLFKKFHTLA LDEIPVFGLH
401: NRTAAYRFVT LVDVMYENRA RLLCTAEANP QELLEKIITI SEAKSMGPRT SSRSRKNDVT ELCVDNELGF AKDRTISRLT EMNSKEYLEH HAITHNL

Arabidopsis Description

AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L517]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.