Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G054200.1 | Wheat | mitochondrion | 78.47 | 79.37 |
| TraesCS3D01G053700.1 | Wheat | mitochondrion | 77.98 | 78.62 |
| EER90502 | Sorghum | mitochondrion | 78.63 | 78.12 |
| HORVU3Hr1G010290.1 | Barley | cytosol, mitochondrion | 78.14 | 76.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.98 | 65.33 |
| PGSC0003DMT400052752 | Potato | cytosol | 46.82 | 61.85 |
| VIT_04s0008g05270.t01 | Wine grape | mitochondrion | 60.69 | 61.49 |
| Solyc06g066090.2.1 | Tomato | mitochondrion | 58.56 | 60.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.15 | 60.0 |
| CDX76756 | Canola | mitochondrion | 57.1 | 59.93 |
| CDY11525 | Canola | mitochondrion | 56.93 | 59.76 |
| Bra007794.1-P | Field mustard | mitochondrion | 56.44 | 59.25 |
| KRH05135 | Soybean | mitochondrion | 56.28 | 58.18 |
| AT2G25530.1 | Thale cress | cytosol, nucleus, vacuole | 56.77 | 53.13 |
| Zm00001d034868_P002 | Maize | plastid | 32.46 | 49.14 |
| GSMUA_AchrUn_... | Banana | plastid | 17.78 | 46.19 |
| Os08t0265500-01 | Rice | mitochondrion | 5.55 | 18.78 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4334807 | ProteinID:ABF99936.1 | InterPro:ATPase_AFG1-like | ProteinID:BAF13833.1 | ProteinID:BAS87396.1 |
| ProteinID:BAS87397.1 | ncoils:Coil | ProteinID:EEE60316.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003824 | GO:GO:0004148 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006260 | GO:GO:0008026 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008375 | GO:GO:0008408 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016787 |
| GO:GO:0016818 | GO:GO:0019538 | GO:GO:0019725 | GO:GO:0030163 | GO:GO:0045454 | GO:GO:0050660 |
| GO:GO:0055114 | GO:GO:0090305 | EnsemblPlantsGene:Os03g0851900 | EnsemblPlants:Os03t0851900-01 | InterPro:P-loop_NTPase | PFAM:PF03969 |
| PANTHER:PTHR12169 | PANTHER:PTHR12169:SF5 | UniProt:Q10AH7 | SUPFAM:SSF52540 | UniParc:UPI0000DB43DA | RefSeq:XP_015627806.1 |
| SEG:seg | : | : | : | : | : |
Description
ATPase, AFG1-like domain containing protein. (Os03t0851900-01);Similar to ATPase. (Os03t0851900-02)
Coordinates
chr3:-:35868734..35875491
Molecular Weight (calculated)
69648.7 Da
IEP (calculated)
7.725
GRAVY (calculated)
-0.345
Length
613 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPRLHRAIA RRSLLTSTAL LPAVARHRDA PLPSAPGLPR LLHHAPGASD QARKSGPLTL YRDLVSQGKL QHDIYQENVA TQLDNLLRRL EQYEMEMEDY
101: HARLSMWENT REKQRRRLLV QEAEDKQRDG VWIDEKRGFL DKLVSRKRRG NIEPGVGKWV SYLNREKKLD TLVGQKPVAP IAPKGIYLYG NVGSGKTMLM
201: DMFYGATEGL IKHRRRFHFH EAMLEIHDHM HDVWKRRDED KSIESSAFSW ISSLPFDGKI KEWLIGEEKY KQNTQQNHIL LAVADKFLVD RQANKSGASI
301: LCFDEIQTID VFAVVALSGI LSRLLSTGTV LVSTSNKAPE DLNQDGMQRE IFLDLLSKLD ENCNKILVGT ETDYRRLIPT DGLTQIHYFW PLTSDIRSMY
401: EAMWHDITRQ TGGNIISVTI PVMFGRYLEI PKSCNGVARF DFEYLCGRPV GAADYIAIAR NYHTIFISDI PAMSMKIRDK ARRFITLIDE LYNHHCRLVC
501: LAASSIDDLF QGTDEGPLFD LESFQFEGEA EGAKLRRDVL AEGNVGAAPS PTGLVAILSG QEEMFAFRRA ISRLIEMQTS LYLERVERVH SSLQQQSSVL
601: TKSSTVSQSA PSV
101: HARLSMWENT REKQRRRLLV QEAEDKQRDG VWIDEKRGFL DKLVSRKRRG NIEPGVGKWV SYLNREKKLD TLVGQKPVAP IAPKGIYLYG NVGSGKTMLM
201: DMFYGATEGL IKHRRRFHFH EAMLEIHDHM HDVWKRRDED KSIESSAFSW ISSLPFDGKI KEWLIGEEKY KQNTQQNHIL LAVADKFLVD RQANKSGASI
301: LCFDEIQTID VFAVVALSGI LSRLLSTGTV LVSTSNKAPE DLNQDGMQRE IFLDLLSKLD ENCNKILVGT ETDYRRLIPT DGLTQIHYFW PLTSDIRSMY
401: EAMWHDITRQ TGGNIISVTI PVMFGRYLEI PKSCNGVARF DFEYLCGRPV GAADYIAIAR NYHTIFISDI PAMSMKIRDK ARRFITLIDE LYNHHCRLVC
501: LAASSIDDLF QGTDEGPLFD LESFQFEGEA EGAKLRRDVL AEGNVGAAPS PTGLVAILSG QEEMFAFRRA ISRLIEMQTS LYLERVERVH SSLQQQSSVL
601: TKSSTVSQSA PSV
001: MSRTGPHRVW QIWHPSFDIS TKPTKEIYTD TNKPNQQYDK RSIFHHLNRD RKASLQRRNH NRSLKQQIMP NVSQISTVLR LAFSCKRRLS NGLHFVARSY
101: STSDPPKQPS GPLTNYSKLV EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK KEDDGMWASV NKQGQKLLGR
201: WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP
301: MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL
401: NQDGMQKEIF DKFISKLEKH CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV MFGRTVEVPE SCSGVARFTF
501: EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKAR RFITLVDELY NHHCCLVSSA ETAIDELFQG TAEGTLFDLE SFQFETETED SRLRRDVLAE
601: GSISAAGSPS SIVSMLSGEE EMFAFARAAS RLIEMQTPLY LEGVRFLHPY FHQQK
101: STSDPPKQPS GPLTNYSKLV EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK KEDDGMWASV NKQGQKLLGR
201: WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP
301: MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL
401: NQDGMQKEIF DKFISKLEKH CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV MFGRTVEVPE SCSGVARFTF
501: EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKAR RFITLVDELY NHHCCLVSSA ETAIDELFQG TAEGTLFDLE SFQFETETED SRLRRDVLAE
601: GSISAAGSPS SIVSMLSGEE EMFAFARAAS RLIEMQTPLY LEGVRFLHPY FHQQK
Arabidopsis Description
AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKJ6]
SUBAcon: [cytosol,nucleus,vacuole]
SUBAcon: [cytosol,nucleus,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.