Factsheet for GSMUA_AchrUn_randomP06960_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G054200.1	Wheat	mitochondrion	47.88	18.65
EER90502	Sorghum	mitochondrion	48.73	18.64
TraesCS3D01G053700.1	Wheat	mitochondrion	47.88	18.59
VIT_04s0008g05270.t01	Wine grape	mitochondrion	46.19	18.02
Solyc06g066090.2.1	Tomato	mitochondrion	44.92	17.85
Os03t0851900-01	Rice	plasma membrane	46.19	17.78
KRH05135	Soybean	mitochondrion	44.49	17.71
HORVU3Hr1G010290.1	Barley	cytosol, mitochondrion	45.76	17.17
Bra007794.1-P	Field mustard	mitochondrion	40.25	16.27
CDY11525	Canola	mitochondrion	40.25	16.27
CDX76756	Canola	mitochondrion	40.25	16.27
PGSC0003DMT400052752	Potato	cytosol	31.78	16.16
AT2G25530.1	Thale cress	cytosol, nucleus, vacuole	40.68	14.66
GSMUA_Achr3P28020_001	Banana	mitochondrion	16.1	7.79
GSMUA_Achr1P10190_001	Banana	mitochondrion	14.83	6.84
Zm00001d034868_P002	Maize	plastid	4.66	2.72
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
GSMUA_AchrUn_...	Banana	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP06960_001	EnsemblPlants:GSMUA_AchrUn_randomT06960_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG06960_001	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AFG1-like	ncoils:Coil	PANTHER:PTHR12169	PANTHER:PTHR12169:SF5
PFAM:PF03969	SEG:seg	UniParc:UPI000295775D	UniProt:M0U707	MapMan:35.2	:

Description

ATPase, AFG1 family domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG06960_001]

Coordinates

chrchrUn_random:+:30491261..30494710

Molecular Weight (calculated)

27876.5 Da

IEP (calculated)

10.386

GRAVY (calculated)

-0.672

Length

236 amino acids

Sequence
(BLAST)

001: MRAFFSSSSS LFSRAFFHSR RTLAHEFSNH DRHRPLINAR CFSGEPSQTS ACLRPGPLAH YRSMVREGKL KYDTYQERVA FELEELLGKL QCYQKEMEDY
101: HVKLATWEKN RENERRKLLL EEAELKQKDG VWIDTKNHKS SFIDKWISRR RRRQNVEPGV GKMVSYFNRE KKLDSVVGVQ PVPPTAPKGL YLYGNVGSGK
201: TMLMDMFYSA TKGIVKHRRR FHFHEVIFFL SWTVIY

Best Arabidopsis Sequence Match ( AT2G25530.1 )
(BLAST)

001: MSRTGPHRVW QIWHPSFDIS TKPTKEIYTD TNKPNQQYDK RSIFHHLNRD RKASLQRRNH NRSLKQQIMP NVSQISTVLR LAFSCKRRLS NGLHFVARSY
101: STSDPPKQPS GPLTNYSKLV EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK KEDDGMWASV NKQGQKLLGR
201: WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP
301: MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL
401: NQDGMQKEIF DKFISKLEKH CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV MFGRTVEVPE SCSGVARFTF
501: EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKAR RFITLVDELY NHHCCLVSSA ETAIDELFQG TAEGTLFDLE SFQFETETED SRLRRDVLAE
601: GSISAAGSPS SIVSMLSGEE EMFAFARAAS RLIEMQTPLY LEGVRFLHPY FHQQK

Arabidopsis Description

AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKJ6]
SUBAcon: [vacuole,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.