Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g066090.2.1 | Tomato | mitochondrion | 90.52 | 70.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.02 | 57.78 |
| VIT_04s0008g05270.t01 | Wine grape | mitochondrion | 69.4 | 53.22 |
| KRH05135 | Soybean | mitochondrion | 65.95 | 51.6 |
| CDX76756 | Canola | mitochondrion | 63.79 | 50.68 |
| Bra007794.1-P | Field mustard | mitochondrion | 63.58 | 50.51 |
| CDY11525 | Canola | mitochondrion | 63.15 | 50.17 |
| EER90502 | Sorghum | mitochondrion | 62.5 | 47.0 |
| Os03t0851900-01 | Rice | plasma membrane | 61.85 | 46.82 |
| TraesCS3A01G054200.1 | Wheat | mitochondrion | 60.56 | 46.37 |
| TraesCS3D01G053700.1 | Wheat | mitochondrion | 60.34 | 46.05 |
| AT2G25530.1 | Thale cress | cytosol, nucleus, vacuole | 64.87 | 45.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.16 | 45.45 |
| HORVU3Hr1G010290.1 | Barley | cytosol, mitochondrion | 60.99 | 44.99 |
| Zm00001d034868_P002 | Maize | plastid | 30.17 | 34.57 |
| GSMUA_AchrUn_... | Banana | plastid | 16.16 | 31.78 |
| PGSC0003DMT400029004 | Potato | mitochondrion | 23.06 | 21.27 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400052752 | EnsemblPlantsGene:PGSC0003DMG400020474 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:ATPase_AFG1-like | InterPro:P-loop_NTPase | PANTHER:PTHR12169 | PANTHER:PTHR12169:SF5 | PFAM:PF03969 | PGSC:PGSC0003DMG400020474 |
| SEG:seg | SUPFAM:SSF52540 | UniParc:UPI000296E7E1 | UniProt:M1BTX9 | MapMan:35.2 | : |
Description
Atpase n2b [Source:PGSC_GENE;Acc:PGSC0003DMG400020474]
Coordinates
chr6:-:45644713..45652647
Molecular Weight (calculated)
52804.5 Da
IEP (calculated)
8.927
GRAVY (calculated)
-0.345
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEYHAKLAQ WEDNRESRRR KLLMEEAEAK QQGAFKPINK SRNIFQRWMS RKPEDVEEGV GKWVSYLNRE KKLDSQVGRR PAAPPAPKGL YLYGNVGSGK
101: TMLMDMFYKA SEGIVKHRRR FHFHEAMLKI NEHMHKIWKS QMEQKSRQSS ISGWVMNLPF DSKVKEWIAA EERYKQEVQM KNILLDVADK FLVNQADRRR
201: GASILCFDEV QTVDVFAIVA LSGILSRLLS TGTVLVATSN RAPTDLNQVH YIWPLNSNIK REFEDIWNKI SKQAGGSIIS HTIPVMFGRT LEVPESCNGV
301: ARFNFEYLCG RPLGAADYIA VAKNYHTVFI SDIPIMSMRI RDKARRFITL IDELYNHHCC LYCSAETSVE DLFQGTAEGT LFDLESFQFE TEIEGTKLRR
401: DVLAEGNVSS GGAPSGITTM LSGQEEMFAF RRAVSDFHCY ASVFFVSVYL AMGSPRGKGI GLNA
101: TMLMDMFYKA SEGIVKHRRR FHFHEAMLKI NEHMHKIWKS QMEQKSRQSS ISGWVMNLPF DSKVKEWIAA EERYKQEVQM KNILLDVADK FLVNQADRRR
201: GASILCFDEV QTVDVFAIVA LSGILSRLLS TGTVLVATSN RAPTDLNQVH YIWPLNSNIK REFEDIWNKI SKQAGGSIIS HTIPVMFGRT LEVPESCNGV
301: ARFNFEYLCG RPLGAADYIA VAKNYHTVFI SDIPIMSMRI RDKARRFITL IDELYNHHCC LYCSAETSVE DLFQGTAEGT LFDLESFQFE TEIEGTKLRR
401: DVLAEGNVSS GGAPSGITTM LSGQEEMFAF RRAVSDFHCY ASVFFVSVYL AMGSPRGKGI GLNA
001: MSRTGPHRVW QIWHPSFDIS TKPTKEIYTD TNKPNQQYDK RSIFHHLNRD RKASLQRRNH NRSLKQQIMP NVSQISTVLR LAFSCKRRLS NGLHFVARSY
101: STSDPPKQPS GPLTNYSKLV EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK KEDDGMWASV NKQGQKLLGR
201: WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP
301: MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL
401: NQDGMQKEIF DKFISKLEKH CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV MFGRTVEVPE SCSGVARFTF
501: EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKAR RFITLVDELY NHHCCLVSSA ETAIDELFQG TAEGTLFDLE SFQFETETED SRLRRDVLAE
601: GSISAAGSPS SIVSMLSGEE EMFAFARAAS RLIEMQTPLY LEGVRFLHPY FHQQK
101: STSDPPKQPS GPLTNYSKLV EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK KEDDGMWASV NKQGQKLLGR
201: WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP
301: MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL
401: NQDGMQKEIF DKFISKLEKH CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV MFGRTVEVPE SCSGVARFTF
501: EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKAR RFITLVDELY NHHCCLVSSA ETAIDELFQG TAEGTLFDLE SFQFETETED SRLRRDVLAE
601: GSISAAGSPS SIVSMLSGEE EMFAFARAAS RLIEMQTPLY LEGVRFLHPY FHQQK
Arabidopsis Description
AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKJ6]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.