Factsheet for GSMUA_AchrUn_randomP06970_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g066090.2.1	Tomato	mitochondrion	62.42	17.34
EER90502	Sorghum	mitochondrion	62.42	16.69
TraesCS3A01G054200.1	Wheat	mitochondrion	61.21	16.67
TraesCS3D01G053700.1	Wheat	mitochondrion	61.21	16.61
CDX76756	Canola	mitochondrion	58.18	16.44
PGSC0003DMT400052752	Potato	cytosol	45.45	16.16
Os03t0851900-01	Rice	plasma membrane	60.0	16.15
Bra007794.1-P	Field mustard	mitochondrion	56.97	16.1
HORVU3Hr1G010290.1	Barley	cytosol, mitochondrion	61.21	16.06
VIT_04s0008g05270.t01	Wine grape	mitochondrion	58.79	16.03
KRH05135	Soybean	mitochondrion	56.97	15.85
CDY11525	Canola	mitochondrion	55.76	15.75
AT2G25530.1	Thale cress	cytosol, nucleus, vacuole	58.18	14.66
GSMUA_Achr3P28020_001	Banana	mitochondrion	21.82	7.38
GSMUA_Achr1P10190_001	Banana	mitochondrion	21.82	7.03
Zm00001d034868_P002	Maize	plastid	5.45	2.22
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
GSMUA_AchrUn_...	Banana	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP06970_001	EnsemblPlants:GSMUA_AchrUn_randomT06970_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG06970_001	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AFG1-like	PANTHER:PTHR12169	PANTHER:PTHR12169:SF5	PFAM:PF03969
SEG:seg	UniParc:UPI000295B758	UniProt:M0U708	MapMan:35.2	:	:

Description

ATPase, AFG1 family domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG06970_001]

Coordinates

chrchrUn_random:+:30528429..30537021

Molecular Weight (calculated)

18821.6 Da

IEP (calculated)

6.011

GRAVY (calculated)

-0.265

Length

165 amino acids

Sequence
(BLAST)

001: MLKIHEHMHE IWKNQAEEQS QQSSVFSWID SLPFNAKVKE WLVGEERYKQ ELHSKHILAS VADNFLIDRK ADKTGASILC FDEIQTVDVF AIVALSGIVS
101: KLLTTGTVLV TTSNKAPENL NQDGMQKDIF LSFLSKLEEN CQKILIGSDI DYRRLIPNKR MDQVS

Best Arabidopsis Sequence Match ( AT2G25530.2 )
(BLAST)

001: MSRTGPHRVW QIWHPSFDIS TKPTKEIYTD TNKPNQQYDK RSIFHHLNRD RKASLQRRNH NRSLKQQIMP NVSQISTVLR LAFSCKRRLS NGLHFVARSY
101: STSDPPKQPS GPLTNYSKLV EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK KEDDGMWASV NKQGQKLLGR
201: WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP
301: MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL
401: NQDGMQKEIF DKFISKLEKH CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV MFGRTVEVPE SCSGVARFTF
501: EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKV

Arabidopsis Description

AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKJ6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.