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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007794.1-P Field mustard mitochondrion 98.8 98.8
CDX76756 Canola mitochondrion 98.29 98.29
AT2G25530.1 Thale cress cytosol, nucleus, vacuole 88.53 78.93
PGSC0003DMT400052752 Potato cytosol 50.17 63.15
VIT_04s0008g05270.t01 Wine grape mitochondrion 64.9 62.64
Solyc06g066090.2.1 Tomato mitochondrion 63.36 62.29
KRH05135 Soybean mitochondrion 61.99 61.05
GSMUA_AchrUn_... Banana cytosol 22.6 58.67
TraesCS3A01G054200.1 Wheat mitochondrion 59.93 57.76
TraesCS3D01G053700.1 Wheat mitochondrion 60.1 57.73
Os03t0851900-01 Rice plasma membrane 59.76 56.93
GSMUA_AchrUn_... Banana nucleus 15.75 55.76
HORVU3Hr1G010290.1 Barley cytosol, mitochondrion 59.93 55.64
EER90502 Sorghum mitochondrion 58.73 55.59
GSMUA_AchrUn_... Banana plastid 16.27 40.25
Zm00001d034868_P002 Maize plastid 26.37 38.02
CDY19007 Canola mitochondrion 23.29 28.57
CDX89206 Canola mitochondrion 23.29 28.57
CDY39208 Canola mitochondrion 23.63 27.54
CDX72246 Canola mitochondrion 23.29 27.25
Protein Annotations
EnsemblPlants:CDY11525EnsemblPlantsGene:GSBRNA2T00049608001Gene3D:3.40.50.300GO:A0A078FAY8GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005524InterPro:ATPase_AFG1-likeInterPro:P-loop_NTPasencoils:CoilPANTHER:PTHR12169
PANTHER:PTHR12169:SF5PFAM:PF03969ProteinID:CDY11525ProteinID:CDY11525.1SEG:segSUPFAM:SSF52540
UniParc:UPI0004EEBE3EUniProt:A0A078FAY8MapMan:35.2:::
Description
BnaA09g40910DBnaA09g40910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAY8]
Coordinates
chrLK032011:-:805710..808546
Molecular Weight (calculated)
67066.3 Da
IEP (calculated)
6.866
GRAVY (calculated)
-0.445
Length
584 amino acids
Sequence
(BLAST)
001: MRKVSQISAV LRLAFSSSRR SRHTNGCRSY CTPPNPTPSG PLTSYSNLVE QGRLQHDPYQ EKVASAFQNL FGRLEHFEKE MEDYHVRLEE WEKKREEERR
101: RLMVEEAEKK EEDGVWASMN KQGQKLLGRW VLGRRQMNVE PGVGKWVSYL NRERKLDSIV GSRPAIPSAP KGLYIYGNVG CGKTMLMDMF YSATDGMIRH
201: RQRFHFHEAM LKINEQMHKY WKENGEEKSS QYSVSSWIMN LPVDERVKEW IAGEEFYKQQ LQMKHILPAV ADKFLVDQQS IKKGASILCF DEIQTVDVFA
301: IVALSGIMSR LLNTGTVLVA TSNRAPRELN QDGMQKEIFD KFISKLEKHC EIISIGSEVD YRRVAAKNSV EHVHYLWPLN NAVMEEFEKM WRQVTDQYGG
401: ELTSATLPVM FGRTVDVPES CKGVARFTFE YLCGRPVGAA DYIAVAKNYH TIFISEIPAM SMEIRDKARR FITLVDELYN HHCCLVSSAE TPIDELFQGT
501: AEGTLFDLES FQFETETEDS RLRRDVLAEG SISAAGSPSS IVKMLSGEEE MFAFARAASR LIEMQTPLYL EGVRFLHPYF HQPK
Best Arabidopsis Sequence Match ( AT2G25530.1 )
(BLAST)
001: MSRTGPHRVW QIWHPSFDIS TKPTKEIYTD TNKPNQQYDK RSIFHHLNRD RKASLQRRNH NRSLKQQIMP NVSQISTVLR LAFSCKRRLS NGLHFVARSY
101: STSDPPKQPS GPLTNYSKLV EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK KEDDGMWASV NKQGQKLLGR
201: WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP
301: MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL
401: NQDGMQKEIF DKFISKLEKH CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV MFGRTVEVPE SCSGVARFTF
501: EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKAR RFITLVDELY NHHCCLVSSA ETAIDELFQG TAEGTLFDLE SFQFETETED SRLRRDVLAE
601: GSISAAGSPS SIVSMLSGEE EMFAFARAAS RLIEMQTPLY LEGVRFLHPY FHQQK
Arabidopsis Description
AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKJ6]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.