Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G054200.1 | Wheat | mitochondrion | 90.94 | 94.39 |
| TraesCS3D01G053700.1 | Wheat | mitochondrion | 90.78 | 93.91 |
| Os03t0851900-01 | Rice | plasma membrane | 76.15 | 78.14 |
| EER90502 | Sorghum | mitochondrion | 75.68 | 77.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.06 | 61.21 |
| PGSC0003DMT400052752 | Potato | cytosol | 44.99 | 60.99 |
| Solyc06g066090.2.1 | Tomato | mitochondrion | 57.07 | 60.44 |
| CDX76756 | Canola | mitochondrion | 55.8 | 60.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.46 | 60.0 |
| CDY11525 | Canola | mitochondrion | 55.64 | 59.93 |
| VIT_04s0008g05270.t01 | Wine grape | mitochondrion | 57.55 | 59.83 |
| Bra007794.1-P | Field mustard | mitochondrion | 55.33 | 59.59 |
| KRH05135 | Soybean | mitochondrion | 54.53 | 57.84 |
| AT2G25530.1 | Thale cress | cytosol, nucleus, vacuole | 55.8 | 53.59 |
| Zm00001d034868_P002 | Maize | plastid | 29.73 | 46.17 |
| GSMUA_AchrUn_... | Banana | plastid | 17.17 | 45.76 |
| HORVU1Hr1G082690.6 | Barley | mitochondrion | 21.78 | 27.08 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G010290.1 | EnsemblPlantsGene:HORVU3Hr1G010290 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:ATPase_AFG1-like | InterPro:P-loop_NTPase | ncoils:Coil | PANTHER:PTHR12169 | PANTHER:PTHR12169:SF5 | PFAM:PF03969 |
| SEG:seg | SUPFAM:SSF52540 | UniParc:UPI000B4752A4 | UniProt:A0A287K2P1 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr3H:+:22513178..22520195
Molecular Weight (calculated)
69992.2 Da
IEP (calculated)
7.067
GRAVY (calculated)
-0.390
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XLALPLPPPA MLLRLRVGRL PADPRPSSPP PPACDPPSLP ALPLPRRLHD AADHRPKPGG PLTLYRDLVS QGKLRHDVYQ ENVASDLDSL
101: LGRLERYEME MEDYHTKLSM WDSSREKERR RLLVEEAEDK QHDGVWIDEK RGFLDKLMSR KRRANIEPGV GRWVSYLNRE RKLDNLVGQK PVAPVAPKGL
201: YLYGNVGSGK TMLMDMFYGA TEGVIKHRRR FHFHEAMLEI HDHMHDVWKR RDDGKSMESS AFSWISGLPF DAKIKEWLIG EEKYKQDKHQ KHILLAVADK
301: FLVDRQANKC GASILCFDEI QTIDVFAIVA LSGILSRLLS TGTVLVATSN KAPEDLNQDG MQREIFLELL SKLDETCNKI LVGTETDYRR LIPTDGSTQI
401: HYYWPTNPDT RSMFEAMWHD ITNQAGGNIT AVTIPVMFGR SIEIPQSCSG VARFDFEYLC GRPVGAADYI AIARNYHTIF ISDLPAMSMK IRDKARRFIT
501: LIDEMYNHHC RLICLATLPI DNLFQGTEEG PLFDLESFQF ETEAEGSKLR RDVSAEGNVG VGPSTKGLVS MLSGQEEMFA FRRAISRLIE MQTPLYLERV
601: QHVHSSGLQQ QQGAPVLTKQ STVSQSAPL
101: LGRLERYEME MEDYHTKLSM WDSSREKERR RLLVEEAEDK QHDGVWIDEK RGFLDKLMSR KRRANIEPGV GRWVSYLNRE RKLDNLVGQK PVAPVAPKGL
201: YLYGNVGSGK TMLMDMFYGA TEGVIKHRRR FHFHEAMLEI HDHMHDVWKR RDDGKSMESS AFSWISGLPF DAKIKEWLIG EEKYKQDKHQ KHILLAVADK
301: FLVDRQANKC GASILCFDEI QTIDVFAIVA LSGILSRLLS TGTVLVATSN KAPEDLNQDG MQREIFLELL SKLDETCNKI LVGTETDYRR LIPTDGSTQI
401: HYYWPTNPDT RSMFEAMWHD ITNQAGGNIT AVTIPVMFGR SIEIPQSCSG VARFDFEYLC GRPVGAADYI AIARNYHTIF ISDLPAMSMK IRDKARRFIT
501: LIDEMYNHHC RLICLATLPI DNLFQGTEEG PLFDLESFQF ETEAEGSKLR RDVSAEGNVG VGPSTKGLVS MLSGQEEMFA FRRAISRLIE MQTPLYLERV
601: QHVHSSGLQQ QQGAPVLTKQ STVSQSAPL
001: MSRTGPHRVW QIWHPSFDIS TKPTKEIYTD TNKPNQQYDK RSIFHHLNRD RKASLQRRNH NRSLKQQIMP NVSQISTVLR LAFSCKRRLS NGLHFVARSY
101: STSDPPKQPS GPLTNYSKLV EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK KEDDGMWASV NKQGQKLLGR
201: WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP
301: MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL
401: NQDGMQKEIF DKFISKLEKH CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV MFGRTVEVPE SCSGVARFTF
501: EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKAR RFITLVDELY NHHCCLVSSA ETAIDELFQG TAEGTLFDLE SFQFETETED SRLRRDVLAE
601: GSISAAGSPS SIVSMLSGEE EMFAFARAAS RLIEMQTPLY LEGVRFLHPY FHQQK
101: STSDPPKQPS GPLTNYSKLV EQGRLQHDPY QEKVVSAFEN LFGRLEHFEK QMEDYHVRLA EWEKKREEER RKLMVEEAEK KEDDGMWASV NKQGQKLLGR
201: WVLGRRQMNV EPGVGKWVSY LNRERKLDSI VGSRPAVPPA PKGLYIYGNV GCGKTMLMDM FYGATDGIIR HRQRFHFHEA MLKINEQMHK YWKENGAEKP
301: MQYSISSWIM NLPVDEKVKE WLAGEEFYKQ QLQMKHILPA VADKFLVDQQ SSKKGASILC FDEIQTVDVF AIVALSGIMS RLLTTGTVLV ATSNRAPREL
401: NQDGMQKEIF DKFISKLEKH CEIISIGSEV DYRRVAAKNS AENVHYLWPL NDAVLEEFEK MWRQVTDQYG GEITSATLPV MFGRTVEVPE SCSGVARFTF
501: EYLCGRPVGA ADYIAVAKNY HTIFISDIPA MSMEIRDKAR RFITLVDELY NHHCCLVSSA ETAIDELFQG TAEGTLFDLE SFQFETETED SRLRRDVLAE
601: GSISAAGSPS SIVSMLSGEE EMFAFARAAS RLIEMQTPLY LEGVRFLHPY FHQQK
Arabidopsis Description
AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKJ6]
SUBAcon: [cytosol,nucleus,vacuole]
SUBAcon: [cytosol,nucleus,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.