Factsheet for AT4G30490.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024072.1-P	Field mustard	cytosol	73.44	92.64
CDY39208	Canola	mitochondrion	87.53	86.83
CDX72246	Canola	mitochondrion	86.52	86.17
AT4G28070.2	Thale cress	mitochondrion	66.6	69.98
VIT_11s0037g00990.t01	Wine grape	mitochondrion	66.8	65.87
KRH72370	Soybean	mitochondrion	65.79	65.27
PGSC0003DMT400029004	Potato	mitochondrion	65.59	64.81
Solyc07g006160.2.1	Tomato	mitochondrion	65.39	64.61
GSMUA_Achr3P28020_001	Banana	mitochondrion	62.37	63.52
KRH02973	Soybean	mitochondrion	64.19	63.42
Zm00001d002967_P005	Maize	mitochondrion	61.37	60.52
GSMUA_Achr1P10190_001	Banana	mitochondrion	61.77	59.96
TraesCS1A01G372400.2	Wheat	mitochondrion	60.76	59.92
KXG26754	Sorghum	plastid	61.17	59.73
Zm00001d025892_P003	Maize	mitochondrion, plastid	60.76	59.33
TraesCS1B01G392400.1	Wheat	mitochondrion	59.96	58.55
HORVU1Hr1G082690.6	Barley	mitochondrion	59.56	58.5
EES13629	Sorghum	plastid	59.56	58.15
TraesCS1D01G379000.4	Wheat	mitochondrion	58.95	57.56
Os08t0265500-01	Rice	mitochondrion	14.89	40.88
AT2G25530.1	Thale cress	cytosol, nucleus, vacuole	27.57	20.92

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	EntrezGene:829172	UniProt:A0A178UYG0	ProteinID:AEE85772.1	ArrayExpress:AT4G30490
EnsemblPlantsGene:AT4G30490	RefSeq:AT4G30490	TAIR:AT4G30490	RefSeq:AT4G30490-TAIR-G	EnsemblPlants:AT4G30490.1	TAIR:AT4G30490.1
InterPro:ATPase_AFG1-like	EMBL:AY087968	EMBL:AY099610	Unigene:At.60046	EMBL:BT000265	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0009507	GO:GO:0009536
RefSeq:NP_567847.1	ProteinID:OAO98457.1	InterPro:P-loop_NTPase	PFAM:PF03969	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PANTHER:PTHR12169	PANTHER:PTHR12169:SF6	UniProt:Q8L517	SUPFAM:SSF52540	UniParc:UPI00000AC04D

Description

AFG1-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L517]

Coordinates

chr4:-:14899034..14902144

Molecular Weight (calculated)

56537.9 Da

IEP (calculated)

8.521

GRAVY (calculated)

-0.260

Length

497 amino acids

Sequence
(BLAST)

001: MRPIIRLSSL SRIRWALRNN QERYSSTFYS KSRKLLIGVN QNQALLNTNT DNSSLYSRSS IFRGLSAEAV EAADPATTRV TVSDVNRTGP LVEYERRISN
101: GELMTGDICQ ISALRELQRL YDELVDSVDT CRLDRYNTSD KSSRSRWFWS RLMPQTSYSP VKGLYLYGGV GTGKTMLMDL FFDQLPCTWK KQRIHFHDFM
201: LSVHSRLQKH KGLSDPLEVV AQEIAHDAIL LCLDEFMVTD VADALILNRL FGHLFSNGVI LVATSNRNPD KLYEGGLQRD LFLPFISSLK ERSVVHEIGS
301: AVDYRKLTSA EQGFYFIGKD LSTLLKQKFR QLIGDNVVAR PQVVEVVMGR KLQIPLGANG CAYFPFEELC DRPLGAADYF GLFKKFHTLA LDEIPVFGLH
401: NRTAAYRFVT LVDVMYENRA RLLCTAEANP QELLEKIITI SEAKSMGPRT SSRSRKNDVT ELCVDNELGF AKDRTISRLT EMNSKEYLEH HAITHNL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.