CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016159.1-P	Field mustard	golgi, plasma membrane	100.0	100.0
CDX72776	Canola	plasma membrane	97.39	98.24
AT1G71090.1	Thale cress	plasma membrane	87.36	87.75
VIT_01s0011g04640.t01	Wine grape	plasma membrane	68.19	71.79
KRH38174	Soybean	plasma membrane	68.41	71.36
KRG94282	Soybean	plasma membrane	68.41	70.56
GSMUA_AchrUn_...	Banana	plasma membrane	57.95	67.86
GSMUA_Achr11P...	Banana	plasma membrane	65.36	67.72
TraesCS3D01G530400.1	Wheat	plasma membrane	64.49	66.07
TraesCS3B01G592500.1	Wheat	plasma membrane	64.49	66.07
TraesCS3A01G525200.1	Wheat	plasma membrane	64.05	65.62
HORVU3Hr1G114270.1	Barley	plasma membrane	64.05	64.9
EES07131	Sorghum	golgi, plasma membrane	63.83	64.82
Os08t0191000-01	Rice	golgi, plasma membrane, plastid	63.83	64.4
Zm00001d051044_P001	Maize	golgi, plasma membrane, vacuole	63.18	64.3
HORVU0Hr1G031980.1	Barley	golgi, plasma membrane	64.05	63.64
CDY70057	Canola	golgi, plasma membrane, plastid	34.64	37.59
CDY01222	Canola	golgi, plasma membrane, plastid	33.99	37.05
CDY03621	Canola	cytosol, golgi, plasma membrane	34.64	36.89
CDY58937	Canola	cytosol, golgi, plasma membrane	34.42	36.66
CDY45981	Canola	golgi, plasma membrane, vacuole	11.98	35.71
CDY29492	Canola	plasma membrane	27.23	32.64
CDY20402	Canola	endoplasmic reticulum, plasma membrane, vacuole	27.23	32.3
CDX87589	Canola	golgi, plasma membrane, vacuole	26.36	31.11
CDX68094	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.14	30.93
CDY57767	Canola	plasma membrane	25.49	29.62
CDY55102	Canola	plasma membrane	25.49	29.62
CDY57768	Canola	extracellular, plasma membrane, vacuole	8.5	29.1
CDX85953	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.88	28.77
CDX81425	Canola	plasma membrane	24.18	28.24
CDY18579	Canola	plasma membrane	23.97	27.92
CDY24342	Canola	plasma membrane	22.88	26.72
CDY30361	Canola	golgi, plasma membrane	22.22	25.95
CDY26812	Canola	plasma membrane	22.22	25.95
CDY31514	Canola	mitochondrion, plasma membrane	26.8	25.73
CDY20805	Canola	extracellular, plasma membrane	16.56	24.76

Protein Annotations

EnsemblPlants:CDX96302	EnsemblPlantsGene:GSBRNA2T00102445001	GO:A0A078E5C8	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31419	PANTHER:PTHR31419:SF7
PFAM:PF03547	ProteinID:CDX96302	ProteinID:CDX96302.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002541335
MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:	:	:

Description

BnaA07g29130D

Coordinates

chrLK031894:+:192405..194298

Molecular Weight (calculated)

50102.0 Da

IEP (calculated)

5.662

GRAVY (calculated)

0.589

Length

459 amino acids

Sequence
(BLAST)

001: MSGNNVSSRV MDILSGIVPL MKLISLTVIG LLLAHPKTQL VPRATFRLLS KLVFALFLPC LIFTELGESI TLDNIVRWWF IPVNVLLSTI IGSFIGYLVV
101: LVCRPPPEFT RVTIVMTAFG NTGNLLLAIV SSVCHSKNNP FGSGCHSRGV SYVSFAQWVA VILVYTVVYH MMEPPLEYYE VVEDEGGVEN LEIEEIAVAN
201: SNDVSRPLLV EAEWPGIEEK ETEHCKTPFI ARVFNSISSY SQTSFPEVVD LMGETGGGES SSPRSLQCLA EPRVIRRMRV VAEQTPVKHI LQPPTIASLL
301: AIVVGSVPQL KSIVFGYEAP LSFITDSLNI MASAMVPSVM LVLGGMLSEG PRESTLGLRT TVGITVARLL VLPLVGIGIV MSADKLGLIS PDPMFKFVLL
401: LQYSTPSAIL LGAIASLRGY AVREASALLF WQHVFALLSL TFYIIVFFKL TVDNVQDVP

Best Arabidopsis Sequence Match ( AT1G71090.1 )
(BLAST)

001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ

Arabidopsis Description

PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.