Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G114270.1 | Barley | plasma membrane | 98.05 | 100.0 |
| TraesCS3D01G530400.1 | Wheat | plasma membrane | 93.72 | 96.65 |
| TraesCS3B01G592500.1 | Wheat | plasma membrane | 93.29 | 96.21 |
| TraesCS3A01G525200.1 | Wheat | plasma membrane | 93.07 | 95.98 |
| EES07131 | Sorghum | golgi, plasma membrane | 84.42 | 86.28 |
| Zm00001d051044_P001 | Maize | golgi, plasma membrane, vacuole | 84.2 | 86.25 |
| Os08t0191000-01 | Rice | golgi, plasma membrane, plastid | 83.12 | 84.4 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 68.83 | 81.12 |
| GSMUA_Achr11P... | Banana | plasma membrane | 76.84 | 80.14 |
| VIT_01s0011g04640.t01 | Wine grape | plasma membrane | 67.75 | 71.79 |
| KRH38174 | Soybean | plasma membrane | 66.88 | 70.23 |
| KRG94282 | Soybean | plasma membrane | 66.67 | 69.21 |
| VIT_14s0006g01970.t01 | Wine grape | golgi, mitochondrion, plasma membrane, plastid | 69.05 | 66.46 |
| VIT_18s0001g00940.t01 | Wine grape | plasma membrane | 53.25 | 65.6 |
| PGSC0003DMT400078752 | Potato | plasma membrane | 63.85 | 65.27 |
| AT1G71090.1 | Thale cress | plasma membrane | 64.5 | 65.21 |
| Solyc02g091240.1.1 | Tomato | golgi, plasma membrane | 63.64 | 65.04 |
| CDX72776 | Canola | plasma membrane | 63.42 | 64.4 |
| Bra016159.1-P | Field mustard | golgi, plasma membrane | 63.64 | 64.05 |
| CDX96302 | Canola | golgi, plasma membrane | 63.64 | 64.05 |
| VIT_18s0001g00260.t01 | Wine grape | plasma membrane | 39.83 | 59.74 |
| HORVU3Hr1G080640.5 | Barley | plasma membrane | 35.71 | 38.19 |
| HORVU4Hr1G050910.5 | Barley | golgi, plasma membrane, plastid | 33.98 | 32.98 |
| HORVU5Hr1G087880.13 | Barley | plasma membrane | 25.54 | 27.63 |
| HORVU5Hr1G073630.3 | Barley | golgi, plasma membrane, vacuole | 24.03 | 27.01 |
| HORVU6Hr1G094970.4 | Barley | golgi | 24.24 | 25.87 |
| HORVU4Hr1G082680.2 | Barley | cytosol, endoplasmic reticulum, plasma membrane | 11.69 | 23.18 |
| HORVU5Hr1G073670.1 | Barley | cytosol | 24.24 | 20.9 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G031980.1 | EnsemblPlantsGene:HORVU0Hr1G031980 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31419 | PANTHER:PTHR31419:SF2 | PFAM:PF03547 |
| TMHMM:TMhelix | UniParc:UPI000B4748A7 | UniProt:A0A287EAN1 | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | : |
Description
No Description!
Coordinates
chrchrUn:-:190794856..190796244
Molecular Weight (calculated)
50411.6 Da
IEP (calculated)
7.759
GRAVY (calculated)
0.594
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: RRQAAALPTM DPQVAVRGGD WVSAVTPLLK LLCLTVIGLL LAHPRAQVVP KATFKLLSKL VFALFLPCLI FVHLGQSVTL HNVLHWWFIP VNVLIATAVG
101: CALGYAVALV CRPPPRFFRF TVIMTGFGNT GNLPIAIIGS VCHTTDHPFG PGCHREGIAY VSFAQWVAVL LVYTLVYHMM EPPMQYYEIV GEGNEIERVP
201: EEEETQVSNF SRPLLQEAEW PGMAEKVMEH SKTPFIARIF ASISGSSQNT FPDIDFSEEG GISGAGPSSP KSLRCLAEPK VVRRMRVVAE KTPIQHVLQP
301: PTIASLLAII IGMVPVLKAF VFGADAPLSF FTDSLEILAA AVVPSVMLIL GGMLAEGPND NALGKRTIIG IIVARLLILP CIGIGIVILA DKLNLLVEND
401: YMYRFVLSLQ YSTPSAILLG AIASLRGYSV KEASALLFWQ HICAVFSLSI YLVVYFKLLS YI
101: CALGYAVALV CRPPPRFFRF TVIMTGFGNT GNLPIAIIGS VCHTTDHPFG PGCHREGIAY VSFAQWVAVL LVYTLVYHMM EPPMQYYEIV GEGNEIERVP
201: EEEETQVSNF SRPLLQEAEW PGMAEKVMEH SKTPFIARIF ASISGSSQNT FPDIDFSEEG GISGAGPSSP KSLRCLAEPK VVRRMRVVAE KTPIQHVLQP
301: PTIASLLAII IGMVPVLKAF VFGADAPLSF FTDSLEILAA AVVPSVMLIL GGMLAEGPND NALGKRTIIG IIVARLLILP CIGIGIVILA DKLNLLVEND
401: YMYRFVLSLQ YSTPSAILLG AIASLRGYSV KEASALLFWQ HICAVFSLSI YLVVYFKLLS YI
001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
Arabidopsis Description
PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.