Factsheet for HORVU5Hr1G087880.13

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G356700.1	Wheat	plasma membrane	94.38	96.64
TraesCS5A01G354300.1	Wheat	plasma membrane	93.21	95.67
KXG36159	Sorghum	plasma membrane	80.09	82.41
Os09t0554300-01	Rice	plasma membrane	82.44	82.24
TraesCS5D01G361600.2	Wheat	mitochondrion, plasma membrane	94.38	77.65
Os09t0555100-00	Rice	plasma membrane	74.94	75.65
Zm00001d021413_P002	Maize	plasma membrane	70.73	67.11
Zm00001d007499_P001	Maize	plasma membrane	25.06	66.46
GSMUA_Achr10P...	Banana	golgi, plasma membrane	61.83	64.08
GSMUA_Achr2P03670_001	Banana	golgi, plasma membrane, vacuole	60.19	63.61
GSMUA_Achr9P21210_001	Banana	plasma membrane	61.59	62.47
GSMUA_Achr10P...	Banana	golgi, plasma membrane	58.78	60.63
Zm00001d040149_P001	Maize	plasma membrane	36.07	60.39
AT5G65980.1	Thale cress	plasma membrane	55.5	60.0
CDY57767	Canola	plasma membrane	55.5	60.0
CDY55102	Canola	plasma membrane	55.5	60.0
CDX81425	Canola	plasma membrane	54.8	59.54
Zm00001d025364_P002	Maize	plasma membrane	46.37	59.46
CDY18579	Canola	plasma membrane	54.8	59.39
Bra031803.1-P	Field mustard	plasma membrane	53.4	59.38
VIT_07s0031g02200.t01	Wine grape	plasma membrane	56.44	57.24
PGSC0003DMT400048041	Potato	plasma membrane	52.93	57.22
Bra002068.1-P	Field mustard	plasma membrane	52.46	57.0
CDY24342	Canola	plasma membrane	52.46	57.0
AT2G17500.2	Thale cress	plasma membrane	52.46	56.57
CDY30361	Canola	golgi, plasma membrane	51.99	56.49
Bra037268.1-P	Field mustard	golgi, plasma membrane	51.99	56.49
CDY26812	Canola	plasma membrane	51.76	56.23
CDY57768	Canola	extracellular, plasma membrane, vacuole	17.56	55.97
PGSC0003DMT400035511	Potato	plasma membrane	52.93	55.8
Solyc02g082450.2.1	Tomato	nucleus	52.46	55.31
HORVU6Hr1G094970.4	Barley	golgi	54.8	54.04
CDY20805	Canola	extracellular, plasma membrane	38.41	53.42
Solyc03g032080.2.1	Tomato	golgi, plasma membrane	29.98	52.67
KRH39407	Soybean	endoplasmic reticulum, plasma membrane, vacuole	49.18	51.34
KRH76521	Soybean	plasma membrane	49.41	50.36
Zm00001d007109_P001	Maize	cytosol, golgi, plastid	36.3	50.16
KRH28941	Soybean	plasma membrane	48.95	49.88
KRH56032	Soybean	extracellular, golgi, plasma membrane	13.58	47.54
HORVU4Hr1G082680.2	Barley	cytosol, endoplasmic reticulum, plasma membrane	23.89	43.78
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	40.52	42.09
Bra037193.1-P	Field mustard	plasma membrane	53.63	37.54
HORVU5Hr1G073670.1	Barley	cytosol	40.52	32.28
HORVU3Hr1G080640.5	Barley	plasma membrane	27.4	27.08
HORVU3Hr1G114270.1	Barley	plasma membrane	27.63	26.05
HORVU0Hr1G031980.1	Barley	golgi, plasma membrane	27.63	25.54
HORVU4Hr1G050910.5	Barley	golgi, plasma membrane, plastid	26.93	24.16

Protein Annotations

EnsemblPlants:HORVU5Hr1G087880.13	EnsemblPlantsGene:HORVU5Hr1G087880	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF3	PFAM:PF03547
TMHMM:TMhelix	UniParc:UPI000B4672D4	UniProt:A0A287S5R5	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:

Description

No Description!

Coordinates

chrchr5H:-:579958771..579960944

Molecular Weight (calculated)

46313.1 Da

IEP (calculated)

6.847

GRAVY (calculated)

0.478

Length

427 amino acids

Sequence
(BLAST)

001: MGFLSLLVVA SMPIVQVLLI GVIGAFLASG YSKVFTASAR RDMNKVVFTV FTPSLIFANL AKTVTLSDVI SWWFMPVNIA ITFLVGSALG WLACKILKPP
101: QHFRGLIMAF CSAGNLGNLL LIVVPAVCDE DGNPFGNDRS QCRSRGLSYS SLSMALGGLF IWTYTYSLMQ KSGKLYHKMQ SKSVQCPADS DEEHLQGFKA
201: GDEEAALPPS ASPEEHDEGS RISSDKLTRT EMQEAPLLSC ESDVANNKGF WTNLKEAVHQ LVEELMAPPT ISAIIGFVVG LVPWLKSLII GDGAPLRVIQ
301: DSLELMGNGT IPCITLILGG NLTQGLRKSV LKRSVIVAIV CIRYVAMPVI GIAVVRAAHG VGFLPHDPLY RYVLMLQFAL PPAMNIGTMA QLFDVGQEEC
401: SVIFLWTYLV AAVALTTWST VFMSILS

Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)

001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS

Arabidopsis Description

PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.