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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G354300.1 Wheat plasma membrane 82.24 84.62
TraesCS5B01G356700.1 Wheat plasma membrane 82.01 84.17
KXG36159 Sorghum plasma membrane 81.31 83.86
Os09t0555100-00 Rice plasma membrane 82.48 83.45
HORVU5Hr1G087880.13 Barley plasma membrane 82.24 82.44
TraesCS5D01G361500.1 Wheat plasma membrane 75.93 80.25
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 81.78 67.44
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 62.62 66.34
GSMUA_Achr10P... Banana golgi, plasma membrane 63.78 66.26
Zm00001d021413_P002 Maize plasma membrane 69.63 66.22
GSMUA_Achr9P21210_001 Banana plasma membrane 63.32 64.37
Zm00001d007499_P001 Maize plasma membrane 22.9 60.87
GSMUA_Achr10P... Banana golgi, plasma membrane 58.88 60.87
CDX81425 Canola plasma membrane 53.27 58.02
CDY55102 Canola plasma membrane 53.5 57.97
CDY57767 Canola plasma membrane 53.5 57.97
CDY18579 Canola plasma membrane 53.27 57.87
Zm00001d025364_P002 Maize plasma membrane 44.86 57.66
PGSC0003DMT400048041 Potato plasma membrane 53.04 57.47
AT5G65980.1 Thale cress plasma membrane 53.04 57.47
Bra031803.1-P Field mustard plasma membrane 51.4 57.29
Zm00001d040149_P001 Maize plasma membrane 34.11 57.25
VIT_07s0031g02200.t01 Wine grape plasma membrane 54.91 55.82
PGSC0003DMT400035511 Potato plasma membrane 52.34 55.31
Solyc02g082450.2.1 Tomato nucleus 52.34 55.31
CDY57768 Canola extracellular, plasma membrane, vacuole 17.29 55.22
Bra002068.1-P Field mustard plasma membrane 50.47 54.96
Bra037268.1-P Field mustard golgi, plasma membrane 50.47 54.96
CDY24342 Canola plasma membrane 50.47 54.96
CDY30361 Canola golgi, plasma membrane 50.47 54.96
CDY26812 Canola plasma membrane 50.23 54.71
AT2G17500.2 Thale cress plasma membrane 49.3 53.28
Solyc03g032080.2.1 Tomato golgi, plasma membrane 29.91 52.67
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 49.77 52.08
Zm00001d007109_P001 Maize cytosol, golgi, plastid 36.92 51.13
CDY20805 Canola extracellular, plasma membrane 36.45 50.81
KRH28941 Soybean plasma membrane 49.3 50.36
KRH76521 Soybean plasma membrane 49.07 50.12
KRH56032 Soybean extracellular, golgi, plasma membrane 14.25 50.0
Os09t0491740-01 Rice golgi, plasma membrane, vacuole 33.64 37.99
Bra037193.1-P Field mustard plasma membrane 52.1 36.56
Os05t0481900-01 Rice golgi, plasma membrane, plastid 25.93 25.4
Os08t0191000-01 Rice golgi, plasma membrane, plastid 26.64 25.05
Os01t0818000-01 Rice plasma membrane 25.0 24.77
Protein Annotations
EnsemblPlants:Os09t0554300-01EnsemblPlantsGene:Os09g0554300EntrezGene:4347808GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3
PFAM:PF03547ProteinID:BAF25801.1ProteinID:BAT09336.1ProteinID:EEE70194.1RefSeq:XP_015612647.1TMHMM:TMhelix
UniParc:UPI0000DD9879UniProt:Q0IZR4MapMan:11.2.4.2MapMan:24.2.5.2.2::
Description
PIN likes 7aAuxin efflux carrier domain containing protein. (Os09t0554300-01)
Coordinates
chr9:+:21963654..21968219
Molecular Weight (calculated)
46652.9 Da
IEP (calculated)
7.025
GRAVY (calculated)
0.497
Length
428 amino acids
Sequence
(BLAST)
001: MGFLSLLLVA SMPIVQVLLI GVIGAFLASG YSKILTSSAL RDMNKVVFTV FTPSLMFASL AKTVTLSDVI SWWFMPVNIG ITFIVGGTLG WIACKILKPP
101: QHFRGMIIAF CSAGNLGNLL LIIVPAVCDE DGNPFGKDRS LCRSRGLSYS SLSMALGGLF IWTHTYSLMQ KAGKMYHKMQ SKSIQCPADS DEEHHPAQGH
201: DQVKLDGETA YADEEAALLV SAKLAPEHNE ENQMEAPLLT CEREIANKGG FWTNLKETVH QVVEELMAPP TVSAILGFVV GLVPWLKSLV IGNGAPLRVI
301: QESLQLMGNG TIPCITLILG GNLTQGLRKS VLKRTVIITI VCIRYVIQPL IGMAVVHAAY GVGFLPHDPL YRYVLMMQFA LPPAMNIGTM AQLFDVGQEE
401: CSVIFLWTYL IAAIALTTWS TIFMSILS
Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
Arabidopsis Description
PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.