Factsheet for Os05t0481900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0818000-01	Rice	plasma membrane	75.29	76.16
GSMUA_Achr3P09660_001	Banana	golgi, plasma membrane	61.78	71.05
GSMUA_Achr9P16830_001	Banana	plasma membrane	66.59	69.95
VIT_08s0056g00310.t01	Wine grape	cytosol, golgi, plasma membrane	61.78	66.67
KRH40632	Soybean	plasma membrane	61.33	64.73
KRH00524	Soybean	plasma membrane	60.64	64.01
Solyc10g074790.1.1	Tomato	plasma membrane	60.41	62.26
PGSC0003DMT400071229	Potato	cytosol, golgi, plasma membrane	60.18	62.03
CDY03621	Canola	cytosol, golgi, plasma membrane	60.87	61.72
Bra030441.1-P	Field mustard	golgi, plasma membrane, plastid	59.73	61.7
CDY58937	Canola	cytosol, golgi, plasma membrane	60.64	61.48
Bra014265.1-P	Field mustard	plasma membrane	60.64	61.48
CDY01222	Canola	golgi, plasma membrane, plastid	59.04	61.28
CDY70057	Canola	golgi, plasma membrane, plastid	59.27	61.23
AT5G01990.1	Thale cress	golgi, plasma membrane, vacuole	59.04	59.86
Os08t0191000-01	Rice	golgi, plasma membrane, plastid	35.93	34.51
Os09t0555100-00	Rice	plasma membrane	25.4	26.24
Os09t0554300-01	Rice	plasma membrane	25.4	25.93
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	22.43	25.86

Protein Annotations

MapMan:11.2.4.2	MapMan:24.2.5.2.2	EntrezGene:4339130	ProteinID:AAW56872.1	EMBL:AK106744	ProteinID:BAF17779.1
ProteinID:BAS94591.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:Mem_trans	EnsemblPlantsGene:Os05g0481900	EnsemblPlants:Os05t0481900-01	PFAM:PF03547	PANTHER:PTHR31419
PANTHER:PTHR31419:SF1	UniProt:Q5KQI0	TMHMM:TMhelix	UniParc:UPI00004BA973	RefSeq:XP_015638243.1	SEG:seg

Description

PIN likes 6bAuxin efflux carrier domain containing protein. (Os05t0481900-01);Auxin efflux carrier domain containing protein. (Os05t0481900-02)

Coordinates

chr5:-:23697744..23700670

Molecular Weight (calculated)

47191.0 Da

IEP (calculated)

8.202

GRAVY (calculated)

0.612

Length

437 amino acids

Sequence
(BLAST)

001: MMGRSVLEMV VAAAQGGGGA AGESVLGMFR YAVLPIAKVF VVCFMGFLMA SKRVGVLKPS GRKLLNALVF SLLLPCLIFA QLGRSITIDK IMEWWFIPAN
101: IALGAVSASL VGLIVALIVR PPYPYFKFTI THIGIGNIGN IPLVLISALC RDQLNPFGDS NKCTQDGNAY LSFGQWVGAI IVYTYVFKML APPPGQTFDS
201: CDEERDKLPI KAPNTMSSVA KYPSSAHGNT HEEEPLLSIE EEEEEEGQDV HSLGSKIMIP IKGMVRFLQK KQLLQPPIIA SVLAITLGVV PFLKNLILTD
301: DAPLFFLTDS CLILGEAMIP CILLAVGGNL VDGPGEGSRR LGVRTTVAII FARLILVPIA GIGIVSFADK LGFIPKGDKM FKFVLLLQHS MPTSVLSGAV
401: ANLRGCGKES AAILFWVHIF AVFSMAGWII LYLTMLF

Best Arabidopsis Sequence Match ( AT5G01990.1 )
(BLAST)

001: MIARILAALA DSMEMPVAAG GGSVLGTIKI AVMPIAKVFT MCFLGLLMAS KYVNILPPSG RKLLNGLVFS LLLPCLIFSQ LGQAVTLQKM LQWWFIPVNV
101: VLGTISGSII GFIVASIVRP PYPYFKFTII QIGVGNIGNV PLVLLAALCR DTSNPFGDSE KCSIDGTAYI SFGQWVGAII LYTYVYQMFA PPPEGFDAEE
201: ENLALKTLPV DAAPEQVPLL TQNFPKDFSP TQDLLPVQST EPRGRGVSRK GKIAQIFVFL YEKLKLKQIV QPAIVASILA MILGAIPFTK KLIFTNGAPL
301: FFFTDSCMIL GDAMIPCILL ALGGNLINGP GSSKLGFKTT AAIIIGRLVL VPPVGLGIVT VADKLGFLPA DDKMFRFVLL LQHTMPTSVL SGAVANLRGC
401: GRESAAVLFW VHIFAIFSMA GWMVLYINIL F

Arabidopsis Description

PILS6Protein PIN-LIKES 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN2]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.