Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane, plastid

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:golgi, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030441.1-P Field mustard golgi, plasma membrane, plastid 98.82 98.82
CDY01222 Canola golgi, plasma membrane, plastid 96.45 96.91
CDY58937 Canola cytosol, golgi, plasma membrane 89.36 87.7
AT5G01990.1 Thale cress golgi, plasma membrane, vacuole 89.36 87.7
CDY03621 Canola cytosol, golgi, plasma membrane 88.89 87.24
KRH40632 Soybean plasma membrane 74.0 75.6
KRH00524 Soybean plasma membrane 74.0 75.6
VIT_08s0056g00310.t01 Wine grape cytosol, golgi, plasma membrane 72.34 75.56
GSMUA_Achr3P09660_001 Banana golgi, plasma membrane 63.83 71.05
PGSC0003DMT400071229 Potato cytosol, golgi, plasma membrane 69.5 69.34
Solyc10g074790.1.1 Tomato plasma membrane 69.03 68.87
GSMUA_Achr9P16830_001 Banana plasma membrane 66.19 67.31
TraesCS4B01G172100.1 Wheat golgi, plasma membrane, vacuole 61.7 63.81
TraesCS3B01G373500.1 Wheat plasma membrane 64.3 62.96
TraesCS4A01G132600.1 Wheat golgi, plasma membrane, vacuole 59.81 62.78
TraesCS3D01G335100.1 Wheat plasma membrane 64.07 62.73
TraesCS3A01G341400.1 Wheat plasma membrane 64.07 62.73
EES01656 Sorghum plasma membrane 64.07 62.59
Zm00001d043083_P003 Maize plasma membrane 63.59 62.12
HORVU3Hr1G080640.5 Barley plasma membrane 63.36 62.04
Os01t0818000-01 Rice plasma membrane 62.88 61.57
TraesCS4D01G174100.2 Wheat golgi, plasma membrane, vacuole 61.23 61.37
Os05t0481900-01 Rice golgi, plasma membrane, plastid 61.23 59.27
HORVU4Hr1G050910.5 Barley golgi, plasma membrane, plastid 61.94 55.04
CDX72776 Canola plasma membrane 38.06 35.38
CDX96302 Canola golgi, plasma membrane 37.59 34.64
CDY29492 Canola plasma membrane 28.37 31.33
CDY45981 Canola golgi, plasma membrane, vacuole 11.11 30.52
CDX87589 Canola golgi, plasma membrane, vacuole 27.9 30.33
CDY20402 Canola endoplasmic reticulum, plasma membrane, vacuole 27.66 30.23
CDX68094 Canola endoplasmic reticulum, plasma membrane, vacuole 27.66 30.15
CDY57767 Canola plasma membrane 27.66 29.62
CDY55102 Canola plasma membrane 27.66 29.62
CDX81425 Canola plasma membrane 27.42 29.52
CDY18579 Canola plasma membrane 27.42 29.44
CDX85953 Canola endoplasmic reticulum, plasma membrane, vacuole 25.06 29.04
CDY57768 Canola extracellular, plasma membrane, vacuole 8.98 28.36
CDY24342 Canola plasma membrane 26.24 28.24
CDY26812 Canola plasma membrane 26.0 27.99
CDY30361 Canola golgi, plasma membrane 26.0 27.99
CDY20805 Canola extracellular, plasma membrane 19.15 26.38
CDY31514 Canola mitochondrion, plasma membrane 28.84 25.52
Protein Annotations
MapMan:11.2.4.2MapMan:24.2.5.2.2GO:A0A078JWT9UniProt:A0A078JWT9EnsemblPlants:CDY70057ProteinID:CDY70057
ProteinID:CDY70057.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00096029001InterPro:Mem_transPFAM:PF03547PANTHER:PTHR31419PANTHER:PTHR31419:SF1
TMHMM:TMhelixUniParc:UPI0004EEA2BCSEG:seg:::
Description
BnaA05g35770DBnaA05g35770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWT9]
Coordinates
chrLK041042:+:149..2113
Molecular Weight (calculated)
46046.8 Da
IEP (calculated)
8.975
GRAVY (calculated)
0.626
Length
423 amino acids
Sequence
(BLAST)
001: MITRIISDLM DMPTAVAAGE SVLGTIKIAV MPIAKVFTMC FLGLLMASKY VNILPPSGRK LLNGLVFTLL LPCLIFSQLG QAVTLHKMLQ WWFIPVNVVL
101: GTISGSLIGF LVATIIRPPY PYFKFTIIQI GVGNIGNVPL VLLAALCRDK SNPFGDSEKC SIDGTAYISF GQWVGAIILY TYVYQMFTPP PEGFDGEEEN
201: LPLKNAASPD QVPLLTQNYP KDTPPAQARL PVQSAEPRER EDSKITHIFV YLYEKLKLKQ IIQPAIIASI LAMILGAIPF TKKLIFTNNS PLFFFTDSCM
301: ILGDAMIPCI LLALGGNLIN GPGSSKLGFK TTAAIIVGRL VLVPPAGLGI VTLADKLGFL PAGDKMFRFV LLLQHTMPTS VLSGAVANLR GCGRESAAVL
401: FWVHIFAIFS MAGWMVLYIN ILF
Best Arabidopsis Sequence Match ( AT5G01990.1 )
(BLAST)
001: MIARILAALA DSMEMPVAAG GGSVLGTIKI AVMPIAKVFT MCFLGLLMAS KYVNILPPSG RKLLNGLVFS LLLPCLIFSQ LGQAVTLQKM LQWWFIPVNV
101: VLGTISGSII GFIVASIVRP PYPYFKFTII QIGVGNIGNV PLVLLAALCR DTSNPFGDSE KCSIDGTAYI SFGQWVGAII LYTYVYQMFA PPPEGFDAEE
201: ENLALKTLPV DAAPEQVPLL TQNFPKDFSP TQDLLPVQST EPRGRGVSRK GKIAQIFVFL YEKLKLKQIV QPAIVASILA MILGAIPFTK KLIFTNGAPL
301: FFFTDSCMIL GDAMIPCILL ALGGNLINGP GSSKLGFKTT AAIIIGRLVL VPPVGLGIVT VADKLGFLPA DDKMFRFVLL LQHTMPTSVL SGAVANLRGC
401: GRESAAVLFW VHIFAIFSMA GWMVLYINIL F
Arabidopsis Description
PILS6Protein PIN-LIKES 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN2]
SUBAcon: [golgi,plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.