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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18579 Canola plasma membrane 98.98 98.73
CDY57767 Canola plasma membrane 97.2 96.71
CDY55102 Canola plasma membrane 96.95 96.46
AT5G65980.1 Thale cress plasma membrane 94.66 94.18
CDY57768 Canola extracellular, plasma membrane, vacuole 30.53 89.55
CDY30361 Canola golgi, plasma membrane 66.92 66.92
CDY26812 Canola plasma membrane 66.92 66.92
CDY24342 Canola plasma membrane 66.67 66.67
CDY20805 Canola extracellular, plasma membrane 50.38 64.5
PGSC0003DMT400048041 Potato plasma membrane 62.85 62.53
PGSC0003DMT400035511 Potato plasma membrane 62.85 60.99
Solyc02g082450.2.1 Tomato nucleus 61.83 60.0
Solyc03g032080.2.1 Tomato golgi, plasma membrane 36.13 58.44
VIT_07s0031g02200.t01 Wine grape plasma membrane 61.83 57.72
TraesCS5D01G361500.1 Wheat plasma membrane 58.52 56.79
TraesCS5B01G356700.1 Wheat plasma membrane 59.29 55.88
TraesCS5A01G354300.1 Wheat plasma membrane 59.03 55.77
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 57.0 55.45
KRH76521 Soybean plasma membrane 58.78 55.13
HORVU5Hr1G087880.13 Barley plasma membrane 59.54 54.8
KRH28941 Soybean plasma membrane 58.02 54.42
GSMUA_Achr10P... Banana golgi, plasma membrane 57.0 54.37
GSMUA_Achr10P... Banana golgi, plasma membrane 56.74 53.86
KXG36159 Sorghum plasma membrane 56.49 53.49
Os09t0555100-00 Rice plasma membrane 57.51 53.43
Os09t0554300-01 Rice plasma membrane 58.02 53.27
GSMUA_Achr9P21210_001 Banana plasma membrane 56.74 52.97
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 54.2 52.08
TraesCS6A01G421200.1 Wheat plasma membrane 54.45 51.82
CDY45981 Canola golgi, plasma membrane, vacuole 19.59 50.0
GSMUA_Achr4P25890_001 Banana plasma membrane 53.94 49.88
TraesCS6D01G404400.1 Wheat plasma membrane 54.2 49.65
TraesCS6B01G466900.1 Wheat plasma membrane 55.22 49.32
GSMUA_Achr5P15890_001 Banana golgi, plasma membrane 52.16 48.35
TraesCS4B01G322800.1 Wheat plasma membrane 50.13 47.82
HORVU6Hr1G094970.4 Barley golgi 52.67 47.81
KXG34923 Sorghum plasma membrane 52.42 47.58
TraesCS4D01G319200.1 Wheat plasma membrane 49.62 47.22
OQU93318 Sorghum plasma membrane 50.13 47.02
KRH56032 Soybean extracellular, golgi, plasma membrane 14.5 46.72
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 59.29 44.89
CDY29492 Canola plasma membrane 41.98 43.08
Zm00001d040149_P001 Maize plasma membrane 27.74 42.75
CDX87589 Canola golgi, plasma membrane, vacuole 41.73 42.16
Zm00001d007499_P001 Maize plasma membrane 17.05 41.61
CDY20402 Canola endoplasmic reticulum, plasma membrane, vacuole 40.71 41.34
CDX68094 Canola endoplasmic reticulum, plasma membrane, vacuole 39.69 40.21
Zm00001d021413_P002 Maize plasma membrane 45.29 39.56
CDX85953 Canola endoplasmic reticulum, plasma membrane, vacuole 35.88 38.63
HORVU4Hr1G082680.2 Barley cytosol, endoplasmic reticulum, plasma membrane 22.9 38.63
TraesCS5A01G494900.1 Wheat golgi, peroxisome, plasma membrane, plastid 48.09 36.7
CDY31514 Canola mitochondrion, plasma membrane 41.73 34.31
Zm00001d007109_P001 Maize cytosol, golgi, plastid 26.21 33.33
Zm00001d025364_P002 Maize plasma membrane 27.99 33.03
CDY01222 Canola golgi, plasma membrane, plastid 29.52 27.55
CDY70057 Canola golgi, plasma membrane, plastid 29.52 27.42
CDY58937 Canola cytosol, golgi, plasma membrane 29.52 26.91
CDY03621 Canola cytosol, golgi, plasma membrane 29.01 26.45
CDX96302 Canola golgi, plasma membrane 28.24 24.18
CDX72776 Canola plasma membrane 27.99 24.18
Protein Annotations
EnsemblPlants:CDX81425EnsemblPlantsGene:GSBRNA2T00135007001GO:A0A078CX54GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3
PFAM:PF03547ProteinID:CDX81425ProteinID:CDX81425.1TMHMM:TMhelixUniParc:UPI0004EDF092MapMan:11.2.4.2
MapMan:24.2.5.2.2:::::
Description
BnaC09g08360D
Coordinates
chrLK031824:-:1662198..1664174
Molecular Weight (calculated)
43047.6 Da
IEP (calculated)
6.491
GRAVY (calculated)
0.691
Length
393 amino acids
Sequence
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AQTVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM IILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALGL VKSANKDMDS DPRSLLLPKP
201: QQNQDLEIQV KEKVSTQTYI KDLLHQILEE LFAPPTVGAI LGFIFGATNW LRNLIIGENA PLRVIQDSVK LLGDGTIPCI TLILGGNLIQ GLRSSAVKTS
301: VIVGVICVRY IILPVVGVGV VQLAWSLGYL PPDPLFRYVL MLQFTLPPAM NISTMAQLFD VAQDECSVIF LWTYLVASLA LTMWSTIFLS ILS
Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
Arabidopsis Description
PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.