Factsheet for HORVU4Hr1G082680.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, endoplasmic reticulum

Predictor Summary:

cytosol 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G322800.1	Wheat	plasma membrane	84.98	48.06
TraesCS4D01G319200.1	Wheat	plasma membrane	82.4	46.49
TraesCS5A01G494900.1	Wheat	golgi, peroxisome, plasma membrane, plastid	80.69	36.5
OQU93318	Sorghum	plasma membrane	63.52	35.32
KRH56032	Soybean	extracellular, golgi, plasma membrane	17.17	32.79
Solyc03g032080.2.1	Tomato	golgi, plasma membrane	33.91	32.51
CDY20805	Canola	extracellular, plasma membrane	41.2	31.27
Bra002068.1-P	Field mustard	plasma membrane	41.2	24.43
CDY24342	Canola	plasma membrane	41.2	24.43
CDY26812	Canola	plasma membrane	40.77	24.17
CDY30361	Canola	golgi, plasma membrane	40.77	24.17
Bra037268.1-P	Field mustard	golgi, plasma membrane	40.77	24.17
HORVU5Hr1G087880.13	Barley	plasma membrane	43.78	23.89
HORVU6Hr1G094970.4	Barley	golgi	43.78	23.56
GSMUA_Achr5P15890_001	Banana	golgi, plasma membrane	42.06	23.11
CDY18579	Canola	plasma membrane	39.06	23.1
Bra031803.1-P	Field mustard	plasma membrane	37.77	22.92
CDX81425	Canola	plasma membrane	38.63	22.9
AT2G17500.2	Thale cress	plasma membrane	38.2	22.47
CDY55102	Canola	plasma membrane	37.77	22.28
CDY57767	Canola	plasma membrane	37.77	22.28
GSMUA_Achr4P25890_001	Banana	plasma membrane	40.34	22.12
AT5G65980.1	Thale cress	plasma membrane	37.34	22.03
PGSC0003DMT400035511	Potato	plasma membrane	38.2	21.98
VIT_07s0031g02200.t01	Wine grape	plasma membrane	37.77	20.9
PGSC0003DMT400048041	Potato	plasma membrane	35.19	20.76
Solyc02g082450.2.1	Tomato	nucleus	36.05	20.74
KRH39407	Soybean	endoplasmic reticulum, plasma membrane, vacuole	36.05	20.54
KRH76521	Soybean	plasma membrane	35.19	19.57
KRH28941	Soybean	plasma membrane	34.33	19.09
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	30.04	17.03
Bra037193.1-P	Field mustard	plasma membrane	37.77	14.43
HORVU5Hr1G073670.1	Barley	cytosol	30.04	13.06
HORVU3Hr1G114270.1	Barley	plasma membrane	23.18	11.92
HORVU0Hr1G031980.1	Barley	golgi, plasma membrane	23.18	11.69
HORVU3Hr1G080640.5	Barley	plasma membrane	20.17	10.88
HORVU4Hr1G050910.5	Barley	golgi, plasma membrane, plastid	21.03	10.29
CDY57768	Canola	extracellular, plasma membrane, vacuole	0.43	0.75

Protein Annotations

EnsemblPlants:HORVU4Hr1G082680.2	EnsemblPlantsGene:HORVU4Hr1G082680	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF7	PFAM:PF03547
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B48031B	UniProt:A0A287PVR6	MapMan:11.2.4.2	MapMan:24.2.5.2.2

Description

No Description!

Coordinates

chrchr4H:+:622948039..622950959

Molecular Weight (calculated)

25342.9 Da

IEP (calculated)

5.693

GRAVY (calculated)

0.259

Length

233 amino acids

Sequence
(BLAST)

001: MKRSAQLYKK CSDPTTNIRK EEYPGEAQAE AEAENGSHAA FLPLSSGAFH EEFESDSVHY CTLPSNDVDG SPMRCLRRAK DLLLEILNEL WSPPSVAALI
101: GFTVGAIDKL RPLVTEEDGP LRVVQDTAKL LGGRTTLKPL VVVSIIAIRF VILPACGIGV VKAASKLGFL PRSPLYRYVL LLQSTVPPAM SVGTIAQLFD
201: VGEEECSIIF LWTHLVAALA LTLWSTVFMS LVS

Best Arabidopsis Sequence Match ( AT2G17500.1 )
(BLAST)

001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV

Arabidopsis Description

PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.