Factsheet for HORVU4Hr1G050910.5

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

golgi 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	golgi, plastid
MultiLoc:	golgi
TargetP:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G172100.1	Wheat	golgi, plasma membrane, vacuole	81.3	94.62
TraesCS4A01G132600.1	Wheat	golgi, plasma membrane, vacuole	78.78	93.05
TraesCS4D01G174100.2	Wheat	golgi, plasma membrane, vacuole	80.25	90.52
GSMUA_Achr3P09660_001	Banana	golgi, plasma membrane	57.56	72.11
GSMUA_Achr9P16830_001	Banana	plasma membrane	60.29	68.99
VIT_08s0056g00310.t01	Wine grape	cytosol, golgi, plasma membrane	55.25	64.94
HORVU3Hr1G080640.5	Barley	plasma membrane	58.82	64.81
CDY03621	Canola	cytosol, golgi, plasma membrane	56.51	62.41
Bra030441.1-P	Field mustard	golgi, plasma membrane, plastid	55.46	62.41
Bra014265.1-P	Field mustard	plasma membrane	56.3	62.18
CDY58937	Canola	cytosol, golgi, plasma membrane	56.3	62.18
CDY01222	Canola	golgi, plasma membrane, plastid	54.83	62.0
CDY70057	Canola	golgi, plasma membrane, plastid	55.04	61.94
KRH40632	Soybean	plasma membrane	53.78	61.84
KRH00524	Soybean	plasma membrane	53.15	61.11
PGSC0003DMT400071229	Potato	cytosol, golgi, plasma membrane	53.99	60.61
Solyc10g074790.1.1	Tomato	plasma membrane	53.99	60.61
AT5G01990.1	Thale cress	golgi, plasma membrane, vacuole	54.41	60.09
HORVU3Hr1G114270.1	Barley	plasma membrane	32.98	34.66
HORVU0Hr1G031980.1	Barley	golgi, plasma membrane	32.98	33.98
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	24.58	28.47
HORVU5Hr1G087880.13	Barley	plasma membrane	24.16	26.93
HORVU6Hr1G094970.4	Barley	golgi	22.69	24.94
HORVU5Hr1G073670.1	Barley	cytosol	25.42	22.57
HORVU4Hr1G082680.2	Barley	cytosol, endoplasmic reticulum, plasma membrane	10.29	21.03

Protein Annotations

EnsemblPlants:HORVU4Hr1G050910.5	EnsemblPlantsGene:HORVU4Hr1G050910	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31419	PANTHER:PTHR31419:SF1	PFAM:PF03547
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B4736E8	UniProt:A0A287P0C6	MapMan:11.2.4.2	MapMan:24.2.5.2.2

Description

No Description!

Coordinates

chrchr4H:+:415428840..415440046

Molecular Weight (calculated)

51256.4 Da

IEP (calculated)

10.189

GRAVY (calculated)

0.539

Length

476 amino acids

Sequence
(BLAST)

001: PLAAPGRIGP PTAAHSQIHR SRSREARPPK KREIIRLGRL TNCAHACVLA LLLVISLPIH RRRGGTHMME TSLMEAVLSG GTGESILTSM KFAVLPIAKV
101: FTLCFMGFLM ATRYIGILDA NGRKLLNGLV FSLLLPCLIF TQLGRAITVQ KLLDWWYIPV NIVLGTVSGS LVGLLVALIV RPPRPYFKFT VVHIAIGNNG
201: NMPLVLIAAL CRDSSNPFGD PEKCKQDGNA YVSFGQWVGA IILYSYVFQM LAPPPGETFD GSRVEKPPPP AMAAAPEQIP LLTPRVSEQA PKCSKALAIL
301: HIFVEKFKLK RVFQPPVIAS ALGISIGATP SLKHFVLTND APLFFLTDAC IILGGAMIPC ILLALGGNLV DGPGPGSKKL GLRTTAAIIF GRLVLVPPAG
401: MCVVALADRL GFIPRGDTMF KFVLLLQHSM PTSVLSGAVA NLRGCGEESA AVLFWMYVCA VFSVAGWMVL YIRTLF

Best Arabidopsis Sequence Match ( AT1G20925.1 )
(BLAST)

001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA

Arabidopsis Description

PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.