Factsheet for HORVU6Hr1G094970.4

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G404400.1	Wheat	plasma membrane	88.91	89.74
TraesCS6A01G421200.1	Wheat	plasma membrane	85.22	89.35
TraesCS6B01G466900.1	Wheat	plasma membrane	85.91	84.55
KXG34923	Sorghum	plasma membrane	63.51	63.51
GSMUA_Achr10P...	Banana	golgi, plasma membrane	54.97	57.77
GSMUA_Achr2P03670_001	Banana	golgi, plasma membrane, vacuole	51.73	55.45
HORVU5Hr1G087880.13	Barley	plasma membrane	54.04	54.8
GSMUA_Achr10P...	Banana	golgi, plasma membrane	51.73	54.11
CDX81425	Canola	plasma membrane	47.81	52.67
CDY55102	Canola	plasma membrane	48.04	52.66
CDY57767	Canola	plasma membrane	47.81	52.41
Bra031803.1-P	Field mustard	plasma membrane	46.42	52.34
AT5G65980.1	Thale cress	plasma membrane	47.58	52.15
CDY18579	Canola	plasma membrane	47.34	52.03
GSMUA_Achr9P21210_001	Banana	plasma membrane	50.35	51.78
CDY30361	Canola	golgi, plasma membrane	46.88	51.65
Bra037268.1-P	Field mustard	golgi, plasma membrane	46.88	51.65
CDY26812	Canola	plasma membrane	46.65	51.4
PGSC0003DMT400035511	Potato	plasma membrane	47.81	51.11
Solyc02g082450.2.1	Tomato	nucleus	47.58	50.86
CDY24342	Canola	plasma membrane	45.96	50.64
Bra002068.1-P	Field mustard	plasma membrane	45.96	50.64
AT2G17500.2	Thale cress	plasma membrane	46.19	50.51
CDY20805	Canola	extracellular, plasma membrane	35.8	50.49
PGSC0003DMT400048041	Potato	plasma membrane	44.8	49.11
VIT_07s0031g02200.t01	Wine grape	plasma membrane	47.34	48.69
Solyc03g032080.2.1	Tomato	golgi, plasma membrane	27.25	48.56
HORVU4Hr1G082680.2	Barley	cytosol, endoplasmic reticulum, plasma membrane	23.56	43.78
KRH76521	Soybean	plasma membrane	42.26	43.68
CDY57768	Canola	extracellular, plasma membrane, vacuole	13.39	43.28
KRH39407	Soybean	endoplasmic reticulum, plasma membrane, vacuole	40.42	42.79
KRH28941	Soybean	plasma membrane	41.34	42.72
KRH56032	Soybean	extracellular, golgi, plasma membrane	11.78	41.8
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	36.03	37.96
Bra037193.1-P	Field mustard	plasma membrane	46.65	33.11
HORVU5Hr1G073670.1	Barley	cytosol	36.03	29.1
HORVU3Hr1G080640.5	Barley	plasma membrane	24.71	24.77
HORVU3Hr1G114270.1	Barley	plasma membrane	25.87	24.72
HORVU0Hr1G031980.1	Barley	golgi, plasma membrane	25.87	24.24
HORVU4Hr1G050910.5	Barley	golgi, plasma membrane, plastid	24.94	22.69

Protein Annotations

EnsemblPlants:HORVU6Hr1G094970.4	EnsemblPlantsGene:HORVU6Hr1G094970	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF3	PFAM:PF03547
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B46BA01	UniProt:A0A287V9X8	MapMan:11.2.4.2	MapMan:24.2.5.2.2

Description

No Description!

Coordinates

chrchr6H:-:582530346..582532384

Molecular Weight (calculated)

45485.0 Da

IEP (calculated)

6.616

GRAVY (calculated)

0.525

Length

433 amino acids

Sequence
(BLAST)

001: MGFVSLLAVA TTPVVEVLLV ALLGAYLASP RCGLLAPSAR ADLNRVVYAV FTPALLLASL ASTVTLQDAL SWWFMPVNIG IVXXXXXXXX WLAVLVLRPP
101: PHLRGLVVAS CSAANFGNLL LIVIPAVCRE DGNPFGGDCT GIGLSYASFS MALGGLYIWT HTHGVMKRSS EVCRRMVADQ AAAEAHDHNK KDSVGVTVIV
201: SVRPEEKGKE EDEDEPSWNE EGRPFSLPSS LSNQHHTAAL TPLLSSGKMT SSDSLWAKLK QGAQQIVEEI MAPPTVGAVL GFTVGTVPWL RSAFIGDSAP
301: LRVVQDSLKL LGDGTIPCVI LILGGNLTKG MRKTTMSRWV IAAIICVRYV ILPVVGVAVV RSARVLGFLP PDPLYEYVLM LQFALPPAMS IGTMAQLYDV
401: AQEECSVIFL WTYLVAALAL TAWSTVFMSI LAA

Best Arabidopsis Sequence Match ( AT2G17500.1 )
(BLAST)

001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV

Arabidopsis Description

PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.