Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037268.1-P | Field mustard | golgi, plasma membrane | 99.49 | 99.49 |
| CDY30361 | Canola | golgi, plasma membrane | 99.49 | 99.49 |
| CDY24342 | Canola | plasma membrane | 94.15 | 94.15 |
| CDY20805 | Canola | extracellular, plasma membrane | 72.52 | 92.83 |
| AT2G17500.2 | Thale cress | plasma membrane | 91.35 | 90.66 |
| CDY18579 | Canola | plasma membrane | 67.43 | 67.26 |
| CDX81425 | Canola | plasma membrane | 66.92 | 66.92 |
| CDY57767 | Canola | plasma membrane | 66.41 | 66.08 |
| CDY55102 | Canola | plasma membrane | 66.41 | 66.08 |
| PGSC0003DMT400035511 | Potato | plasma membrane | 63.1 | 61.23 |
| Solyc02g082450.2.1 | Tomato | nucleus | 62.34 | 60.49 |
| PGSC0003DMT400048041 | Potato | plasma membrane | 60.05 | 59.75 |
| CDY57768 | Canola | extracellular, plasma membrane, vacuole | 20.36 | 59.7 |
| Solyc03g032080.2.1 | Tomato | golgi, plasma membrane | 36.39 | 58.85 |
| VIT_07s0031g02200.t01 | Wine grape | plasma membrane | 62.34 | 58.19 |
| GSMUA_Achr2P03670_001 | Banana | golgi, plasma membrane, vacuole | 55.22 | 53.71 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 55.73 | 53.16 |
| TraesCS5B01G356700.1 | Wheat | plasma membrane | 55.73 | 52.52 |
| KRH28941 | Soybean | plasma membrane | 55.98 | 52.51 |
| TraesCS5A01G354300.1 | Wheat | plasma membrane | 55.22 | 52.16 |
| TraesCS5D01G361500.1 | Wheat | plasma membrane | 53.69 | 52.1 |
| KRH76521 | Soybean | plasma membrane | 55.22 | 51.79 |
| HORVU5Hr1G087880.13 | Barley | plasma membrane | 56.23 | 51.76 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 54.45 | 51.69 |
| TraesCS6A01G421200.1 | Wheat | plasma membrane | 54.2 | 51.57 |
| KXG36159 | Sorghum | plasma membrane | 54.45 | 51.57 |
| KRH39407 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 52.67 | 50.61 |
| GSMUA_Achr9P21210_001 | Banana | plasma membrane | 53.94 | 50.36 |
| Os09t0554300-01 | Rice | plasma membrane | 54.71 | 50.23 |
| Os09t0555100-00 | Rice | plasma membrane | 53.69 | 49.88 |
| TraesCS6D01G404400.1 | Wheat | plasma membrane | 54.2 | 49.65 |
| TraesCS6B01G466900.1 | Wheat | plasma membrane | 54.96 | 49.09 |
| GSMUA_Achr4P25890_001 | Banana | plasma membrane | 52.67 | 48.71 |
| CDY45981 | Canola | golgi, plasma membrane, vacuole | 19.08 | 48.7 |
| TraesCS4B01G322800.1 | Wheat | plasma membrane | 50.13 | 47.82 |
| KXG34923 | Sorghum | plasma membrane | 52.67 | 47.81 |
| GSMUA_Achr5P15890_001 | Banana | golgi, plasma membrane | 50.89 | 47.17 |
| TraesCS4D01G319200.1 | Wheat | plasma membrane | 49.36 | 46.97 |
| HORVU6Hr1G094970.4 | Barley | golgi | 51.4 | 46.65 |
| OQU93318 | Sorghum | plasma membrane | 47.58 | 44.63 |
| KRH56032 | Soybean | extracellular, golgi, plasma membrane | 13.74 | 44.26 |
| Zm00001d007499_P001 | Maize | plasma membrane | 17.56 | 42.86 |
| CDX87589 | Canola | golgi, plasma membrane, vacuole | 41.98 | 42.42 |
| CDY29492 | Canola | plasma membrane | 41.22 | 42.3 |
| CDY20402 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 41.22 | 41.86 |
| TraesCS5D01G361600.2 | Wheat | mitochondrion, plasma membrane | 55.22 | 41.81 |
| HORVU4Hr1G082680.2 | Barley | cytosol, endoplasmic reticulum, plasma membrane | 24.17 | 40.77 |
| Zm00001d021413_P002 | Maize | plasma membrane | 45.55 | 39.78 |
| Zm00001d040149_P001 | Maize | plasma membrane | 25.7 | 39.61 |
| CDX68094 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.93 | 39.43 |
| CDX85953 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 35.88 | 38.63 |
| TraesCS5A01G494900.1 | Wheat | golgi, peroxisome, plasma membrane, plastid | 48.09 | 36.7 |
| Zm00001d025364_P002 | Maize | plasma membrane | 29.26 | 34.53 |
| CDY31514 | Canola | mitochondrion, plasma membrane | 41.22 | 33.89 |
| Zm00001d007109_P001 | Maize | cytosol, golgi, plastid | 24.43 | 31.07 |
| CDY01222 | Canola | golgi, plasma membrane, plastid | 27.99 | 26.13 |
| CDY70057 | Canola | golgi, plasma membrane, plastid | 27.99 | 26.0 |
| CDY58937 | Canola | cytosol, golgi, plasma membrane | 28.5 | 25.99 |
| CDY03621 | Canola | cytosol, golgi, plasma membrane | 27.99 | 25.52 |
| CDX72776 | Canola | plasma membrane | 25.95 | 22.42 |
| CDX96302 | Canola | golgi, plasma membrane | 25.95 | 22.22 |
Protein Annotations
| EnsemblPlants:CDY26812 | EnsemblPlantsGene:GSBRNA2T00035758001 | GO:A0A078GNP9 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31651 | PANTHER:PTHR31651:SF3 |
| PFAM:PF03547 | ProteinID:CDY26812 | ProteinID:CDY26812.1 | TMHMM:TMhelix | UniParc:UPI0004EE8679 | UniProt:A0A078GNP9 |
| MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | : | : | : | : |
Description
BnaC09g09390DBnaC09g09390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNP9]
Coordinates
chrLK032194:+:396008..398300
Molecular Weight (calculated)
43080.9 Da
IEP (calculated)
6.277
GRAVY (calculated)
0.649
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFWSLLEVA SMPVIQVLII SLVGAYLATD RCKLFPVEAR NSMNKVVFVI FAPALMFANL AQTVTLQDMV SWWFMPVNMG LTFLIGGLLG WMVVKILKPP
101: PYLEGLIVAT CSSGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKFKEIEE SEKTAIKSSN SDLEADHKTK
201: LLGAPEGELV KEETGFWRKG VDFLHEILEE LRAPPTVGAI IGFIFGAVTW LRNLIIGDDA PLRIVQATAK LLGDGTIPCM TIILGGNLIQ GLRSSAVKPV
301: VVLGIVCVRY IILPIIGIGV VKTAESFGFL PADPLFQYVL MLQFTLPPAM NIGTMTQLYN VGQDECSVLM LWTYLIAILA LTVWSTIFLH LLV
101: PYLEGLIVAT CSSGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKFKEIEE SEKTAIKSSN SDLEADHKTK
201: LLGAPEGELV KEETGFWRKG VDFLHEILEE LRAPPTVGAI IGFIFGAVTW LRNLIIGDDA PLRIVQATAK LLGDGTIPCM TIILGGNLIQ GLRSSAVKPV
301: VVLGIVCVRY IILPIIGIGV VKTAESFGFL PADPLFQYVL MLQFTLPPAM NIGTMTQLYN VGQDECSVLM LWTYLIAILA LTVWSTIFLH LLV
001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV
Arabidopsis Description
PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.