Factsheet for TraesCS5B01G356700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G354300.1	Wheat	plasma membrane	95.68	95.91
HORVU5Hr1G087880.13	Barley	plasma membrane	96.64	94.38
Os09t0554300-01	Rice	plasma membrane	84.17	82.01
KXG36159	Sorghum	plasma membrane	81.53	81.93
TraesCS5D01G361600.2	Wheat	mitochondrion, plasma membrane	97.84	78.61
Os09t0555100-00	Rice	plasma membrane	76.74	75.65
Zm00001d021413_P002	Maize	plasma membrane	71.22	66.0
Zm00001d007499_P001	Maize	plasma membrane	25.18	65.22
GSMUA_Achr10P...	Banana	golgi, plasma membrane	63.31	64.08
GSMUA_Achr2P03670_001	Banana	golgi, plasma membrane, vacuole	61.63	63.61
GSMUA_Achr9P21210_001	Banana	plasma membrane	63.55	62.95
GSMUA_Achr10P...	Banana	golgi, plasma membrane	59.95	60.39
AT5G65980.1	Thale cress	plasma membrane	56.83	60.0
CDY55102	Canola	plasma membrane	56.59	59.75
CDY57767	Canola	plasma membrane	56.59	59.75
CDX81425	Canola	plasma membrane	55.88	59.29
Zm00001d040149_P001	Maize	plasma membrane	36.21	59.22
CDY18579	Canola	plasma membrane	55.88	59.14
Bra031803.1-P	Field mustard	plasma membrane	54.44	59.11
Zm00001d025364_P002	Maize	plasma membrane	46.28	57.96
PGSC0003DMT400048041	Potato	plasma membrane	53.96	56.96
TraesCS6B01G466900.1	Wheat	plasma membrane	59.95	56.82
CDY57768	Canola	extracellular, plasma membrane, vacuole	18.23	56.72
VIT_07s0031g02200.t01	Wine grape	plasma membrane	57.07	56.53
Bra002068.1-P	Field mustard	plasma membrane	53.24	56.49
CDY24342	Canola	plasma membrane	53.24	56.49
AT2G17500.2	Thale cress	plasma membrane	53.24	56.06
PGSC0003DMT400035511	Potato	plasma membrane	54.44	56.05
CDY30361	Canola	golgi, plasma membrane	52.76	55.98
Bra037268.1-P	Field mustard	golgi, plasma membrane	52.76	55.98
CDY26812	Canola	plasma membrane	52.52	55.73
Solyc02g082450.2.1	Tomato	nucleus	53.96	55.56
CDY20805	Canola	extracellular, plasma membrane	39.33	53.42
Solyc03g032080.2.1	Tomato	golgi, plasma membrane	30.46	52.26
KRH39407	Soybean	endoplasmic reticulum, plasma membrane, vacuole	50.6	51.59
TraesCS4B01G322800.1	Wheat	plasma membrane	50.84	51.46
Zm00001d007109_P001	Maize	cytosol, golgi, plastid	37.41	50.49
KRH76521	Soybean	plasma membrane	50.6	50.36
KRH28941	Soybean	plasma membrane	50.12	49.88
KRH56032	Soybean	extracellular, golgi, plasma membrane	13.91	47.54
Bra037193.1-P	Field mustard	plasma membrane	54.68	37.38
TraesCS5B01G267800.2	Wheat	golgi, plasma membrane, vacuole	32.37	35.81
TraesCS4B01G172100.1	Wheat	golgi, plasma membrane, vacuole	27.82	28.36
TraesCS3B01G373500.1	Wheat	plasma membrane	28.3	27.31
TraesCS3B01G592500.1	Wheat	plasma membrane	28.78	26.79

Protein Annotations

EnsemblPlants:TraesCS5B01G356700.1	EnsemblPlantsGene:TraesCS5B01G356700	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF3	PFAM:PF03547
TMHMM:TMhelix	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:	:

Description

No Description!

Coordinates

chr5B:-:536322818..536324938

Molecular Weight (calculated)

45120.8 Da

IEP (calculated)

6.615

GRAVY (calculated)

0.528

Length

417 amino acids

Sequence
(BLAST)

001: MGFLSLLVVA SMPIVQVLLI GVIGAFLASG YSKVLTASAR RDMNKVVFTV FTPSLIFANL AKTVTMSDVI SWWFMPVNIA ITFLVGSALG WLACKILKPP
101: PHFRGLIMAF CSAGNLGNLL LIVVPAVCDE DGNPFGNDRS QCRSRGLSYS SLSMALGGLF IWTYTYSLMQ KSGKLYHKMQ SKSVQCPADS DEEHLEGFKA
201: GDEEAALPAS AGPDDEHNEG RQIEAPLLSC ESDVANNKGF WTNMKEAVHQ LVEELMAPPT ISAIIGFVVG LVPWLKSLII GDGAPLRVIQ DSLELMGNGT
301: IPCITLILGG NLTQGLRKSV LKRAVIVAIV FIRYVAMPVI GIAVVRAAHG VGFLPHDPLY RYVLMLQFAL PPAMNIGTMA QLFDVGQEEC SVIFLWTYLV
401: AAVALTTWST VFMSILS

Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)

001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS

Arabidopsis Description

PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.