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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24342 Canola plasma membrane 99.49 99.49
CDY20805 Canola extracellular, plasma membrane 76.34 97.72
Bra037268.1-P Field mustard golgi, plasma membrane 93.89 93.89
AT2G17500.2 Thale cress plasma membrane 91.35 90.66
Bra031803.1-P Field mustard plasma membrane 63.61 65.1
PGSC0003DMT400035511 Potato plasma membrane 63.61 61.73
Solyc02g082450.2.1 Tomato nucleus 62.6 60.74
PGSC0003DMT400048041 Potato plasma membrane 60.56 60.25
Solyc03g032080.2.1 Tomato golgi, plasma membrane 36.64 59.26
VIT_07s0031g02200.t01 Wine grape plasma membrane 61.83 57.72
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 54.96 53.47
TraesCS5B01G356700.1 Wheat plasma membrane 56.49 53.24
KRH28941 Soybean plasma membrane 56.74 53.22
TraesCS5D01G361500.1 Wheat plasma membrane 54.71 53.09
TraesCS5A01G354300.1 Wheat plasma membrane 55.98 52.88
KXG36159 Sorghum plasma membrane 55.47 52.53
KRH76521 Soybean plasma membrane 55.98 52.51
HORVU5Hr1G087880.13 Barley plasma membrane 57.0 52.46
GSMUA_Achr10P... Banana golgi, plasma membrane 54.96 52.43
GSMUA_Achr10P... Banana golgi, plasma membrane 54.45 51.69
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 53.44 51.34
Os09t0555100-00 Rice plasma membrane 54.45 50.59
Os09t0554300-01 Rice plasma membrane 54.96 50.47
TraesCS6A01G421200.1 Wheat plasma membrane 52.93 50.36
GSMUA_Achr9P21210_001 Banana plasma membrane 53.69 50.12
TraesCS6D01G404400.1 Wheat plasma membrane 52.93 48.48
GSMUA_Achr4P25890_001 Banana plasma membrane 52.42 48.47
TraesCS4B01G322800.1 Wheat plasma membrane 50.38 48.06
TraesCS6B01G466900.1 Wheat plasma membrane 53.44 47.73
KXG34923 Sorghum plasma membrane 52.16 47.34
TraesCS4D01G319200.1 Wheat plasma membrane 49.62 47.22
GSMUA_Achr5P15890_001 Banana golgi, plasma membrane 50.64 46.93
HORVU6Hr1G094970.4 Barley golgi 50.64 45.96
OQU93318 Sorghum plasma membrane 48.09 45.11
KRH56032 Soybean extracellular, golgi, plasma membrane 13.99 45.08
Zm00001d007499_P001 Maize plasma membrane 17.81 43.48
Bra037193.1-P Field mustard plasma membrane 66.41 42.79
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 55.98 42.39
Bra015736.1-P Field mustard golgi, plasma membrane, vacuole 41.48 41.9
HORVU4Hr1G082680.2 Barley cytosol, endoplasmic reticulum, plasma membrane 24.43 41.2
Bra008264.1-P Field mustard golgi, plasma membrane, vacuole 41.22 40.7
Zm00001d021413_P002 Maize plasma membrane 45.8 40.0
Zm00001d040149_P001 Maize plasma membrane 25.45 39.22
Bra003716.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 38.42 38.92
TraesCS5A01G494900.1 Wheat golgi, peroxisome, plasma membrane, plastid 48.35 36.89
Bra025857.1-P Field mustard plasma membrane 37.66 36.72
Zm00001d025364_P002 Maize plasma membrane 29.77 35.14
Zm00001d007109_P001 Maize cytosol, golgi, plastid 24.43 31.07
Bra030441.1-P Field mustard golgi, plasma membrane, plastid 28.24 26.24
Bra014265.1-P Field mustard plasma membrane 28.5 25.99
Bra016159.1-P Field mustard golgi, plasma membrane 26.72 22.88
Protein Annotations
EnsemblPlants:Bra002068.1EnsemblPlants:Bra002068.1-PEnsemblPlantsGene:Bra002068GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3
PFAM:PF03547TMHMM:TMhelixUniParc:UPI0002543EDDUniProt:M4CCY7MapMan:11.2.4.2MapMan:24.2.5.2.2
Description
AT2G17500 (E=5e-209) | auxin efflux carrier family protein
Coordinates
chrA10:-:11754691..11756837
Molecular Weight (calculated)
43162.8 Da
IEP (calculated)
6.132
GRAVY (calculated)
0.647
Length
393 amino acids
Sequence
(BLAST)
001: MGFWSLLEVA SMPVIQVLFI SVVGAFLATD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDMI SWWFMPVNMG LTFLIGGILG WIVVKILKPP
101: PYLEGLIVAT CSSGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKFKDIEE SEQKAIRSSN SDLEADHKSH
201: LLGAPEETLV KQETGFWRKG VDFLHEILEE LRAPPSVGAI IGFIFGAVTW LRNLIIGDDA PLRIVQTTAK LLGDGTIPCM TIILGGNLIQ GLRSSAVKPV
301: VVLGIVCVRY ILLPIIGIGI VKSAESFGFL PADPLFQYVL MLQFTLPPAM NIGTMTQLYN VGQDECSVLM LWTYLVAILA LTVWSTIFLH LLV
Best Arabidopsis Sequence Match ( AT2G17500.2 )
(BLAST)
001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV
Arabidopsis Description
PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.