Factsheet for Bra016159.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane

Predictor Summary:

plastid 2
extracellular 4
golgi 5
plasma membrane 6
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96302	Canola	golgi, plasma membrane	100.0	100.0
AT1G71090.1	Thale cress	plasma membrane	87.36	87.75
VIT_01s0011g04640.t01	Wine grape	plasma membrane	68.19	71.79
KRH38174	Soybean	plasma membrane	68.41	71.36
KRG94282	Soybean	plasma membrane	68.41	70.56
GSMUA_AchrUn_...	Banana	plasma membrane	57.95	67.86
GSMUA_Achr11P...	Banana	plasma membrane	65.36	67.72
TraesCS3D01G530400.1	Wheat	plasma membrane	64.49	66.07
TraesCS3B01G592500.1	Wheat	plasma membrane	64.49	66.07
TraesCS3A01G525200.1	Wheat	plasma membrane	64.05	65.62
HORVU3Hr1G114270.1	Barley	plasma membrane	64.05	64.9
EES07131	Sorghum	golgi, plasma membrane	63.83	64.82
Os08t0191000-01	Rice	golgi, plasma membrane, plastid	63.83	64.4
Zm00001d051044_P001	Maize	golgi, plasma membrane, vacuole	63.18	64.3
HORVU0Hr1G031980.1	Barley	golgi, plasma membrane	64.05	63.64
Bra030441.1-P	Field mustard	golgi, plasma membrane, plastid	34.42	37.35
Bra014265.1-P	Field mustard	plasma membrane	34.42	36.66
Bra008264.1-P	Field mustard	golgi, plasma membrane, vacuole	27.23	31.41
Bra003716.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	26.14	30.93
Bra015736.1-P	Field mustard	golgi, plasma membrane, vacuole	26.14	30.85
Bra031803.1-P	Field mustard	plasma membrane	25.49	30.47
Bra025857.1-P	Field mustard	plasma membrane	24.18	27.54
Bra002068.1-P	Field mustard	plasma membrane	22.88	26.72
Bra037268.1-P	Field mustard	golgi, plasma membrane	22.22	25.95
Bra037193.1-P	Field mustard	plasma membrane	24.18	18.2

Protein Annotations

MapMan:11.2.4.2	MapMan:24.2.5.2.2	EnsemblPlantsGene:Bra016159	EnsemblPlants:Bra016159.1	EnsemblPlants:Bra016159.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009653	GO:GO:0009719	GO:GO:0009733	GO:GO:0009791	GO:GO:0009987	GO:GO:0010252
GO:GO:0010311	GO:GO:0010315	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021	GO:GO:0040007
GO:GO:0040009	GO:GO:0055085	UniProt:M4DI32	InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31419
PANTHER:PTHR31419:SF7	TMHMM:TMhelix	UniParc:UPI0002541335	SEG:seg	:	:

Description

AT1G71090 (E=3e-209) | auxin efflux carrier family protein

Coordinates

chrA07:+:19122615..19123994

Molecular Weight (calculated)

50102.0 Da

IEP (calculated)

5.662

GRAVY (calculated)

0.589

Length

459 amino acids

Sequence
(BLAST)

001: MSGNNVSSRV MDILSGIVPL MKLISLTVIG LLLAHPKTQL VPRATFRLLS KLVFALFLPC LIFTELGESI TLDNIVRWWF IPVNVLLSTI IGSFIGYLVV
101: LVCRPPPEFT RVTIVMTAFG NTGNLLLAIV SSVCHSKNNP FGSGCHSRGV SYVSFAQWVA VILVYTVVYH MMEPPLEYYE VVEDEGGVEN LEIEEIAVAN
201: SNDVSRPLLV EAEWPGIEEK ETEHCKTPFI ARVFNSISSY SQTSFPEVVD LMGETGGGES SSPRSLQCLA EPRVIRRMRV VAEQTPVKHI LQPPTIASLL
301: AIVVGSVPQL KSIVFGYEAP LSFITDSLNI MASAMVPSVM LVLGGMLSEG PRESTLGLRT TVGITVARLL VLPLVGIGIV MSADKLGLIS PDPMFKFVLL
401: LQYSTPSAIL LGAIASLRGY AVREASALLF WQHVFALLSL TFYIIVFFKL TVDNVQDVP

Best Arabidopsis Sequence Match ( AT1G71090.1 )
(BLAST)

001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ

Arabidopsis Description

PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.