Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07131 | Sorghum | golgi, plasma membrane | 97.56 | 97.35 |
| TraesCS3D01G530400.1 | Wheat | plasma membrane | 87.14 | 87.72 |
| TraesCS3B01G592500.1 | Wheat | plasma membrane | 87.14 | 87.72 |
| Os08t0191000-01 | Rice | golgi, plasma membrane, plastid | 88.25 | 87.47 |
| TraesCS3A01G525200.1 | Wheat | plasma membrane | 86.7 | 87.28 |
| HORVU3Hr1G114270.1 | Barley | plasma membrane | 86.25 | 85.87 |
| HORVU0Hr1G031980.1 | Barley | golgi, plasma membrane | 86.25 | 84.2 |
| GSMUA_Achr11P... | Banana | plasma membrane | 78.05 | 79.46 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 68.74 | 79.08 |
| VIT_01s0011g04640.t01 | Wine grape | plasma membrane | 68.96 | 71.33 |
| KRH38174 | Soybean | plasma membrane | 67.41 | 69.09 |
| KRG94282 | Soybean | plasma membrane | 66.74 | 67.64 |
| VIT_14s0006g01970.t01 | Wine grape | golgi, mitochondrion, plasma membrane, plastid | 69.84 | 65.62 |
| VIT_18s0001g00940.t01 | Wine grape | plasma membrane | 54.32 | 65.33 |
| Solyc02g091240.1.1 | Tomato | golgi, plasma membrane | 64.97 | 64.82 |
| PGSC0003DMT400078752 | Potato | plasma membrane | 64.97 | 64.82 |
| AT1G71090.1 | Thale cress | plasma membrane | 65.63 | 64.77 |
| CDX72776 | Canola | plasma membrane | 64.97 | 64.4 |
| Bra016159.1-P | Field mustard | golgi, plasma membrane | 64.3 | 63.18 |
| CDX96302 | Canola | golgi, plasma membrane | 64.3 | 63.18 |
| VIT_18s0001g00260.t01 | Wine grape | plasma membrane | 41.24 | 60.39 |
| Zm00001d043083_P003 | Maize | plasma membrane | 35.48 | 36.95 |
| Zm00001d007499_P001 | Maize | plasma membrane | 9.53 | 26.71 |
| Zm00001d020953_P001 | Maize | golgi, plasma membrane, vacuole | 23.5 | 25.36 |
| Zm00001d021413_P002 | Maize | plasma membrane | 24.39 | 24.44 |
| Zm00001d040149_P001 | Maize | plasma membrane | 13.75 | 24.31 |
| Zm00001d007109_P001 | Maize | cytosol, golgi, plastid | 15.08 | 22.01 |
| Zm00001d025364_P002 | Maize | plasma membrane | 15.08 | 20.42 |
| Zm00001d024842_P002 | Maize | plasma membrane | 13.75 | 20.06 |
Protein Annotations
| EntrezGene:100281987 | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | ProteinID:AQK53503.1 | UniProt:B6T254 | EMBL:BT055724 |
| EMBL:EU959069 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010311 | GO:GO:0010315 | GO:GO:0010329 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0040007 | GO:GO:0040009 | GO:GO:0055085 | InterPro:Mem_trans | PFAM:PF03547 |
| PANTHER:PTHR31419 | PANTHER:PTHR31419:SF2 | TMHMM:TMhelix | UniParc:UPI000182C0AB | EnsemblPlantsGene:Zm00001d051044 | EnsemblPlants:Zm00001d051044_P001 |
| EnsemblPlants:Zm00001d051044_T001 | SEG:seg | : | : | : | : |
Description
Protein PIN-LIKES 2
Coordinates
chr4:-:138472340..138473695
Molecular Weight (calculated)
49433.5 Da
IEP (calculated)
6.827
GRAVY (calculated)
0.653
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MVWSMDPQVT VHGDWVSAVV PLMKLLCLAV IGLLLANPRV QVVPRATFKL LSKLVFALFL PCLIFVHLGK SVTIDNVLHW WFIPVNVLIS TAIGCALGYI
101: VALICRPPPH LFRFTVIMTG FGNTGNLPIA IIGSVCHTND HPFGPGCDTM GIAYVSFAQW VAVILVYTLV YHMMEPPMQF YEIVGEGNEI QQEPELVSNY
201: SRSLLHEAEW PGMVDKETEH SKTPFIARVF MSISGSSQNT FPDIDFTEEG TSAAGPSSPK SLRCLAEPRV VRRIRVVAEK TPIQHVLQPP TIASLLAITI
301: GMVPVLKDFV FGADAPLSFF TDSLEILAAA VVPSVMLILG GMLAEGPKDN ALGMRTIIGI IVARLLVLPC IGIGVVTLAD RLHLLVEENH MYRFVLSLQY
401: STPSAILLGA IASLRGYGVK EASALLFWQH ICAVFSLSLY LVVYFKLFSF I
101: VALICRPPPH LFRFTVIMTG FGNTGNLPIA IIGSVCHTND HPFGPGCDTM GIAYVSFAQW VAVILVYTLV YHMMEPPMQF YEIVGEGNEI QQEPELVSNY
201: SRSLLHEAEW PGMVDKETEH SKTPFIARVF MSISGSSQNT FPDIDFTEEG TSAAGPSSPK SLRCLAEPRV VRRIRVVAEK TPIQHVLQPP TIASLLAITI
301: GMVPVLKDFV FGADAPLSFF TDSLEILAAA VVPSVMLILG GMLAEGPKDN ALGMRTIIGI IVARLLVLPC IGIGVVTLAD RLHLLVEENH MYRFVLSLQY
401: STPSAILLGA IASLRGYGVK EASALLFWQH ICAVFSLSLY LVVYFKLFSF I
001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
Arabidopsis Description
PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.