Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | plasma membrane | 90.31 | 79.91 |
| TraesCS3D01G530400.1 | Wheat | plasma membrane | 80.61 | 70.54 |
| TraesCS3A01G525200.1 | Wheat | plasma membrane | 80.36 | 70.31 |
| HORVU3Hr1G114270.1 | Barley | plasma membrane | 81.12 | 70.2 |
| TraesCS3B01G592500.1 | Wheat | plasma membrane | 80.1 | 70.09 |
| HORVU0Hr1G031980.1 | Barley | golgi, plasma membrane | 81.12 | 68.83 |
| Zm00001d051044_P001 | Maize | golgi, plasma membrane, vacuole | 79.08 | 68.74 |
| EES07131 | Sorghum | golgi, plasma membrane | 79.08 | 68.58 |
| VIT_01s0011g04640.t01 | Wine grape | plasma membrane | 76.28 | 68.58 |
| Os08t0191000-01 | Rice | golgi, plasma membrane, plastid | 78.83 | 67.91 |
| KRH38174 | Soybean | plasma membrane | 72.19 | 64.32 |
| KRG94282 | Soybean | plasma membrane | 71.43 | 62.92 |
| PGSC0003DMT400078752 | Potato | plasma membrane | 70.41 | 61.06 |
| VIT_14s0006g01970.t01 | Wine grape | golgi, mitochondrion, plasma membrane, plastid | 74.74 | 61.04 |
| Solyc02g091240.1.1 | Tomato | golgi, plasma membrane | 70.15 | 60.84 |
| AT1G71090.1 | Thale cress | plasma membrane | 69.64 | 59.74 |
| CDX72776 | Canola | plasma membrane | 68.62 | 59.12 |
| VIT_18s0001g00940.t01 | Wine grape | plasma membrane | 56.38 | 58.93 |
| CDX96302 | Canola | golgi, plasma membrane | 67.86 | 57.95 |
| Bra016159.1-P | Field mustard | golgi, plasma membrane | 67.86 | 57.95 |
| VIT_18s0001g00260.t01 | Wine grape | plasma membrane | 42.6 | 54.22 |
| GSMUA_Achr3P09660_001 | Banana | golgi, plasma membrane | 38.52 | 39.74 |
| GSMUA_Achr9P16830_001 | Banana | plasma membrane | 40.05 | 37.74 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 30.1 | 28.5 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 29.59 | 28.16 |
| GSMUA_Achr2P03670_001 | Banana | golgi, plasma membrane, vacuole | 28.83 | 27.97 |
| GSMUA_Achr9P21210_001 | Banana | plasma membrane | 28.83 | 26.84 |
| GSMUA_Achr4P25890_001 | Banana | plasma membrane | 29.08 | 26.82 |
| GSMUA_Achr3P03690_001 | Banana | plasma membrane | 28.57 | 26.54 |
| GSMUA_Achr5P15890_001 | Banana | golgi, plasma membrane | 28.57 | 26.42 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP21380_001 | EnsemblPlants:GSMUA_AchrUn_randomT21380_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG21380_001 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | ncoils:Coil | PANTHER:PTHR31419 |
| PANTHER:PTHR31419:SF2 | PFAM:PF03547 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295A50B | UniProt:M0UB46 |
| MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | : | : | : | : |
Description
auxin efflux carrier component, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG21380_001]
Coordinates
chrchrUn_random:+:104400224..104402280
Molecular Weight (calculated)
42751.6 Da
IEP (calculated)
6.920
GRAVY (calculated)
0.845
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MANGSDNLLS AVLPLLKLLC LTVIGLILAH PRIQIVPRAT FKLLSKLVFA LFLPCLIFVH LGQSVTLNDV LLWWFVPVNV LITTATGCFL GYIVALICRP
101: PPQFFRFTII MSGFGNTGNL PIAIVGSVCH GSDNPFGPDC HRTGIAYVSF AQWVAVILVY TFVYHMMEPP MEYYEIVSEE NEIEEELISN ISVAAGPSSP
201: KSLRCLAEPK VVRRIRVVAE QTPIQHILQP PTIASLLALI VGMVPVFKDF VFGYDAPLSF ITDSLDILAG AVVPSVMLIL GGMLAEGPND SALGTRTTIG
301: IIVARLLVLP LIGIGVVALA NKLHLLIEGD QMYRFVLLLQ YTTPSAILLG AIASLRNYAV KEASALLFWQ HICAVVSLSV YIVIYFKLVS YV
101: PPQFFRFTII MSGFGNTGNL PIAIVGSVCH GSDNPFGPDC HRTGIAYVSF AQWVAVILVY TFVYHMMEPP MEYYEIVSEE NEIEEELISN ISVAAGPSSP
201: KSLRCLAEPK VVRRIRVVAE QTPIQHILQP PTIASLLALI VGMVPVFKDF VFGYDAPLSF ITDSLDILAG AVVPSVMLIL GGMLAEGPND SALGTRTTIG
301: IIVARLLVLP LIGIGVVALA NKLHLLIEGD QMYRFVLLLQ YTTPSAILLG AIASLRNYAV KEASALLFWQ HICAVVSLSV YIVIYFKLVS YV
001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
Arabidopsis Description
PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.