Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | plasma membrane | 79.91 | 90.31 |
| TraesCS3D01G530400.1 | Wheat | plasma membrane | 80.36 | 79.46 |
| TraesCS3B01G592500.1 | Wheat | plasma membrane | 80.14 | 79.24 |
| TraesCS3A01G525200.1 | Wheat | plasma membrane | 79.91 | 79.02 |
| HORVU3Hr1G114270.1 | Barley | plasma membrane | 80.14 | 78.37 |
| Zm00001d051044_P001 | Maize | golgi, plasma membrane, vacuole | 79.46 | 78.05 |
| EES07131 | Sorghum | golgi, plasma membrane | 79.01 | 77.43 |
| Os08t0191000-01 | Rice | golgi, plasma membrane, plastid | 79.01 | 76.92 |
| HORVU0Hr1G031980.1 | Barley | golgi, plasma membrane | 80.14 | 76.84 |
| VIT_01s0011g04640.t01 | Wine grape | plasma membrane | 74.04 | 75.23 |
| KRH38174 | Soybean | plasma membrane | 69.3 | 69.77 |
| KRG94282 | Soybean | plasma membrane | 68.85 | 68.54 |
| PGSC0003DMT400078752 | Potato | plasma membrane | 69.75 | 68.36 |
| Solyc02g091240.1.1 | Tomato | golgi, plasma membrane | 69.53 | 68.14 |
| VIT_14s0006g01970.t01 | Wine grape | golgi, mitochondrion, plasma membrane, plastid | 73.14 | 67.5 |
| VIT_18s0001g00940.t01 | Wine grape | plasma membrane | 56.43 | 66.67 |
| AT1G71090.1 | Thale cress | plasma membrane | 68.4 | 66.3 |
| CDX72776 | Canola | plasma membrane | 67.95 | 66.15 |
| Bra016159.1-P | Field mustard | golgi, plasma membrane | 67.72 | 65.36 |
| CDX96302 | Canola | golgi, plasma membrane | 67.72 | 65.36 |
| VIT_18s0001g00260.t01 | Wine grape | plasma membrane | 43.57 | 62.66 |
| GSMUA_Achr3P09660_001 | Banana | golgi, plasma membrane | 33.63 | 39.21 |
| GSMUA_Achr9P16830_001 | Banana | plasma membrane | 34.99 | 37.26 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 26.41 | 28.4 |
| GSMUA_Achr3P03690_001 | Banana | plasma membrane | 26.86 | 28.2 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 26.19 | 28.02 |
| GSMUA_Achr2P03670_001 | Banana | golgi, plasma membrane, vacuole | 24.83 | 27.23 |
| GSMUA_Achr5P15890_001 | Banana | golgi, plasma membrane | 25.96 | 27.12 |
| GSMUA_Achr9P21210_001 | Banana | plasma membrane | 25.73 | 27.08 |
| GSMUA_Achr4P25890_001 | Banana | plasma membrane | 25.51 | 26.59 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P13290_001 | EnsemblPlants:GSMUA_Achr11T13290_001 | EnsemblPlantsGene:GSMUA_Achr11G13290_001 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31419 | PANTHER:PTHR31419:SF2 |
| PFAM:PF03547 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00029521A9 | UniProt:M0RRV9 | MapMan:11.2.4.2 |
| MapMan:24.2.5.2.2 | : | : | : | : | : |
Description
auxin efflux carrier component, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G13290_001]
Coordinates
chr11:-:13471245..13474369
Molecular Weight (calculated)
48467.0 Da
IEP (calculated)
5.987
GRAVY (calculated)
0.651
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGSDNLLS AVVPLMKLLC LTVIGLILAH PRTQIVPRAT FKLLSKLVFA LFLPCLIFVH LGQSVTVDDV LLWWFVPINV LISTAIGCAL GYIVAIVCHP
101: PPQFFRFTII MTGFGNTGNL PIAIVGSVCH SSDNPFGPDC RRAGIAYVSF AQWVAVILVY TFVYHMMEPP MEYYEIVSEE NEIEEEEPIS NASRPLLHEA
201: EWPGMVDKET THSKTPFIAR VFMSISGSSQ NTFPDIDFSE EGGSTAGPSS PKSLRCFAEP KVVQRMRVVA EQTPIRHILQ PPTIASLLAL IVGLVPVFKA
301: FVFGYDAPLS FFTDSLEILA GAVVPSVMLI LGGMLAEGPN DSALGIRTTI GIVVTRLLVL PLVGIGVVAL ADKMHLLIEG DQMYRFVLLL QYTTPSAILL
401: GAIASLRNYA VREASALLFW QHICAVVSLS FYIVIYFKLL SYV
101: PPQFFRFTII MTGFGNTGNL PIAIVGSVCH SSDNPFGPDC RRAGIAYVSF AQWVAVILVY TFVYHMMEPP MEYYEIVSEE NEIEEEEPIS NASRPLLHEA
201: EWPGMVDKET THSKTPFIAR VFMSISGSSQ NTFPDIDFSE EGGSTAGPSS PKSLRCFAEP KVVQRMRVVA EQTPIRHILQ PPTIASLLAL IVGLVPVFKA
301: FVFGYDAPLS FFTDSLEILA GAVVPSVMLI LGGMLAEGPN DSALGIRTTI GIVVTRLLVL PLVGIGVVAL ADKMHLLIEG DQMYRFVLLL QYTTPSAILL
401: GAIASLRNYA VREASALLFW QHICAVVSLS FYIVIYFKLL SYV
001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
Arabidopsis Description
PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.