Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72776 | Canola | plasma membrane | 87.53 | 87.91 |
| Bra016159.1-P | Field mustard | golgi, plasma membrane | 87.75 | 87.36 |
| CDX96302 | Canola | golgi, plasma membrane | 87.75 | 87.36 |
| VIT_01s0011g04640.t01 | Wine grape | plasma membrane | 70.02 | 73.39 |
| KRH38174 | Soybean | plasma membrane | 70.46 | 73.18 |
| KRG94282 | Soybean | plasma membrane | 70.46 | 72.36 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 59.74 | 69.64 |
| GSMUA_Achr11P... | Banana | plasma membrane | 66.3 | 68.4 |
| TraesCS3D01G530400.1 | Wheat | plasma membrane | 65.43 | 66.74 |
| TraesCS3B01G592500.1 | Wheat | plasma membrane | 65.43 | 66.74 |
| TraesCS3A01G525200.1 | Wheat | plasma membrane | 64.99 | 66.29 |
| HORVU3Hr1G114270.1 | Barley | plasma membrane | 65.21 | 65.78 |
| EES07131 | Sorghum | golgi, plasma membrane | 64.99 | 65.71 |
| Zm00001d051044_P001 | Maize | golgi, plasma membrane, vacuole | 64.77 | 65.63 |
| HORVU0Hr1G031980.1 | Barley | golgi, plasma membrane | 65.21 | 64.5 |
| Os08t0191000-01 | Rice | golgi, plasma membrane, plastid | 63.9 | 64.18 |
| AT5G01990.1 | Thale cress | golgi, plasma membrane, vacuole | 35.45 | 37.59 |
| AT1G76520.2 | Thale cress | plasma membrane | 26.48 | 31.03 |
| AT5G65980.1 | Thale cress | plasma membrane | 24.95 | 28.86 |
| AT2G17500.2 | Thale cress | plasma membrane | 24.07 | 27.78 |
| AT1G76530.1 | Thale cress | plasma membrane | 25.16 | 27.71 |
| AT1G20925.1 | Thale cress | plasma membrane | 27.13 | 26.27 |
Protein Annotations
| MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | EntrezGene:843449 | UniProt:A0A178WE07 | ProteinID:AAG51701.1 | ProteinID:AEE35160.1 |
| ArrayExpress:AT1G71090 | EnsemblPlantsGene:AT1G71090 | RefSeq:AT1G71090 | TAIR:AT1G71090 | RefSeq:AT1G71090-TAIR-G | EnsemblPlants:AT1G71090.1 |
| TAIR:AT1G71090.1 | EMBL:AY045993 | EMBL:AY079375 | Unigene:At.17825 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010252 |
| GO:GO:0010311 | GO:GO:0010315 | GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0040007 |
| GO:GO:0040009 | GO:GO:0055085 | InterPro:Mem_trans | RefSeq:NP_565011.1 | ProteinID:OAP16466.1 | PFAM:PF03547 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31419 | PANTHER:PTHR31419:SF7 | UniProt:Q9C999 | TMHMM:TMhelix | UniParc:UPI00000AB016 | SEG:seg |
Description
PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
Coordinates
chr1:+:26812156..26814173
Molecular Weight (calculated)
49882.6 Da
IEP (calculated)
5.413
GRAVY (calculated)
0.593
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.