Factsheet for AT1G76530.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45981	Canola	golgi, plasma membrane, vacuole	30.84	83.12
AT1G76520.2	Thale cress	plasma membrane	78.07	83.08
Bra015736.1-P	Field mustard	golgi, plasma membrane, vacuole	76.87	82.01
CDX87589	Canola	golgi, plasma membrane, vacuole	76.14	81.23
CDY20402	Canola	endoplasmic reticulum, plasma membrane, vacuole	73.98	79.33
CDX85953	Canola	endoplasmic reticulum, plasma membrane, vacuole	69.16	78.63
Bra003716.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	73.49	78.61
CDX68094	Canola	endoplasmic reticulum, plasma membrane, vacuole	73.49	78.61
Bra008264.1-P	Field mustard	golgi, plasma membrane, vacuole	73.98	77.14
KRH38085	Soybean	extracellular	7.23	58.82
AT1G20925.1	Thale cress	plasma membrane	62.89	55.3
TraesCS5D01G275200.1	Wheat	plasma membrane	40.48	54.37
KRH07852	Soybean	golgi, plasma membrane, vacuole	14.46	52.17
PGSC0003DMT400025706	Potato	endoplasmic reticulum, plasma membrane, vacuole	50.84	51.84
Solyc04g082830.2.1	Tomato	plasma membrane	49.4	51.77
Solyc12g095750.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	49.88	49.4
VIT_04s0044g01870.t01	Wine grape	plasma membrane	44.82	48.95
GSMUA_Achr3P03690_001	Banana	plasma membrane	48.92	48.1
KRH76489	Soybean	endoplasmic reticulum, plasma membrane, vacuole	47.95	47.95
KRH28961	Soybean	golgi, plasma membrane, vacuole	47.95	47.95
KRH39386	Soybean	golgi, plasma membrane, vacuole	47.23	47.34
KRH07859	Soybean	golgi, plasma membrane, vacuole	47.23	47.34
EER99100	Sorghum	golgi, plasma membrane, vacuole	47.23	47.34
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	46.51	46.96
KRH34529	Soybean	golgi, plasma membrane	44.34	46.0
VIT_04s0044g01860.t01	Wine grape	golgi, plasma membrane, vacuole	46.27	45.93
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	41.93	45.91
EER99101	Sorghum	golgi, plasma membrane, vacuole	45.78	45.89
KXG35918	Sorghum	plasma membrane	45.78	45.89
PGSC0003DMT400075596	Potato	plasma membrane	22.17	44.88
VIT_04s0044g01850.t01	Wine grape	golgi, plasma membrane, vacuole	44.82	44.5
VIT_04s0044g01890.t01	Wine grape	endoplasmic reticulum, extracellular	13.98	43.61
AT5G65980.1	Thale cress	plasma membrane	40.72	42.78
TraesCS5B01G267800.2	Wheat	golgi, plasma membrane, vacuole	38.55	42.44
KRG92281	Soybean	plasma membrane	41.69	42.3
VIT_04s0044g01880.t01	Wine grape	plastid	46.75	42.27
TraesCS5A01G267300.1	Wheat	extracellular	25.06	42.11
KRH66552	Soybean	plasma membrane	42.89	41.98
KRG92282	Soybean	plasma membrane	25.06	40.15
KRH48800	Soybean	plasma membrane	40.24	39.95
AT2G17500.2	Thale cress	plasma membrane	37.59	39.39
KRH48798	Soybean	plasma membrane	38.8	38.52
HORVU5Hr1G073670.1	Barley	cytosol	46.51	36.01
KRH34530	Soybean	cytosol, endoplasmic reticulum, plasma membrane	26.75	35.46
KRG89678	Soybean	plasma membrane	16.87	35.0
KRH07851	Soybean	plasma membrane	24.58	34.34
AT5G01990.1	Thale cress	golgi, plasma membrane, vacuole	26.75	25.75
AT1G71090.1	Thale cress	plasma membrane	27.71	25.16
Zm00001d024842_P002	Maize	plasma membrane	13.98	18.77

Protein Annotations

MapMan:11.2.4.2	MapMan:24.2.5.2.2	EntrezGene:843986	ProteinID:AAG51958.1	ProteinID:AEE35856.1	ProteinID:ANM58623.1
ArrayExpress:AT1G76530	EnsemblPlantsGene:AT1G76530	RefSeq:AT1G76530	TAIR:AT1G76530	RefSeq:AT1G76530-TAIR-G	EnsemblPlants:AT1G76530.1
TAIR:AT1G76530.1	Unigene:At.52532	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009719	GO:GO:0009733	GO:GO:0009734	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:Mem_trans	RefSeq:NP_001319388.1	RefSeq:NP_001321045.1	PFAM:PF03547	PO:PO:0000013
PO:PO:0000230	PO:PO:0001054	PO:PO:0001081	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0020100
PO:PO:0025022	PANTHER:PTHR31651	PANTHER:PTHR31651:SF6	UniProt:Q9C9K4	TMHMM:TMhelix	UniParc:UPI000009E4D8
SEG:seg	:	:	:	:	:

Description

PILS4Protein PIN-LIKES 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K4]

Coordinates

chr1:+:28718069..28720371

Molecular Weight (calculated)

45588.5 Da

IEP (calculated)

7.428

GRAVY (calculated)

0.481

Length

415 amino acids

Sequence
(BLAST)

001: MKLLELFIAS SKPVVETLLI TSVGFYLALD TVNLLGHDAR KHLNNIVFYV FSPSLIGSRL ADSVTYESLV KMWFMPVNVL LTFMIGSLLG WIVIVITKPP
101: SQLRGLIISC CASGNLGTMP LIIIPAICKE KGGPFGDSES CEKYGMGYVT LSMTAFFISV YKHDTNWYVS GGNGLLMDLY INLMRVLSNS PVETHTHSIE
201: SNYDDSCKVQ LISSKEEEKE EDNHQVGRWE EVKQRVVSLS KKVNLGSIFA PATIAAIIAL VIGLITPLRN LIIGTVAPFR VIQDSLTLLG DGAIPAMTLI
301: LGGNLLKGMR RSEVRSSEMK NSCIIGVLVA RYILLPVSGV LLVRGAYKLD LVTSEPLYQF VLLLQYAVPP AMNLGTKTQL FGAGESECSV IMLWTYSLAA
401: VSLTVWPTFF MWLVT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.