Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45981 | Canola | golgi, plasma membrane, vacuole | 26.05 | 64.29 |
| VIT_04s0044g01890.t01 | Wine grape | endoplasmic reticulum, extracellular | 21.84 | 62.41 |
| VIT_04s0044g01880.t01 | Wine grape | plastid | 70.79 | 58.61 |
| TraesCS5D01G275200.1 | Wheat | plasma membrane | 46.84 | 57.61 |
| GSMUA_Achr3P03690_001 | Banana | plasma membrane | 61.84 | 55.69 |
| KRH39386 | Soybean | golgi, plasma membrane, vacuole | 60.53 | 55.56 |
| KRH07859 | Soybean | golgi, plasma membrane, vacuole | 60.53 | 55.56 |
| KRH76489 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 57.89 | 53.01 |
| KRH28961 | Soybean | golgi, plasma membrane, vacuole | 57.89 | 53.01 |
| CDY29492 | Canola | plasma membrane | 53.16 | 52.74 |
| VIT_04s0044g01860.t01 | Wine grape | golgi, plasma membrane, vacuole | 56.84 | 51.67 |
| VIT_04s0044g01850.t01 | Wine grape | golgi, plasma membrane, vacuole | 56.58 | 51.44 |
| Bra003716.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 51.84 | 50.77 |
| CDX68094 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 51.84 | 50.77 |
| AT1G76520.2 | Thale cress | plasma membrane | 52.11 | 50.77 |
| CDY20402 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 51.58 | 50.65 |
| EER99100 | Sorghum | golgi, plasma membrane, vacuole | 54.47 | 50.0 |
| EER99101 | Sorghum | golgi, plasma membrane, vacuole | 54.47 | 50.0 |
| KXG35918 | Sorghum | plasma membrane | 54.21 | 49.76 |
| Bra015736.1-P | Field mustard | golgi, plasma membrane, vacuole | 50.79 | 49.61 |
| CDX87589 | Canola | golgi, plasma membrane, vacuole | 50.79 | 49.61 |
| Bra008264.1-P | Field mustard | golgi, plasma membrane, vacuole | 51.84 | 49.5 |
| HORVU5Hr1G073630.3 | Barley | golgi, plasma membrane, vacuole | 53.42 | 49.39 |
| Os09t0491740-01 | Rice | golgi, plasma membrane, vacuole | 47.89 | 48.02 |
| CDX85953 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.05 | 47.95 |
| TraesCS5B01G267800.2 | Wheat | golgi, plasma membrane, vacuole | 44.74 | 45.09 |
| AT1G76530.1 | Thale cress | plasma membrane | 48.95 | 44.82 |
| Bra025857.1-P | Field mustard | plasma membrane | 47.11 | 44.42 |
| AT1G20925.1 | Thale cress | plasma membrane | 55.0 | 44.28 |
| TraesCS5A01G267300.1 | Wheat | extracellular | 27.63 | 42.51 |
| CDY31514 | Canola | mitochondrion, plasma membrane | 52.89 | 42.05 |
| VIT_07s0031g02200.t01 | Wine grape | plasma membrane | 42.63 | 38.48 |
| HORVU5Hr1G073670.1 | Barley | cytosol | 53.42 | 37.87 |
| VIT_08s0056g00310.t01 | Wine grape | cytosol, golgi, plasma membrane | 32.63 | 30.62 |
| VIT_01s0011g04640.t01 | Wine grape | plasma membrane | 31.32 | 27.29 |
| VIT_14s0006g01970.t01 | Wine grape | golgi, mitochondrion, plasma membrane, plastid | 30.79 | 24.38 |
| VIT_18s0001g00260.t01 | Wine grape | plasma membrane | 19.47 | 24.03 |
| VIT_18s0001g00940.t01 | Wine grape | plasma membrane | 21.58 | 21.87 |
Protein Annotations
| EntrezGene:100255141 | wikigene:100255141 | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | ProteinID:CCB60379 | ProteinID:CCB60379.1 |
| UniProt:F6I0B3 | EMBL:FN596506 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EntrezGene:LOC100255141 | wikigene:LOC100255141 | InterPro:Mem_trans | PFAM:PF03547 |
| PANTHER:PTHR31651 | PANTHER:PTHR31651:SF6 | TMHMM:TMhelix | UniParc:UPI000210A579 | ArrayExpress:VIT_04s0044g01870 | EnsemblPlantsGene:VIT_04s0044g01870 |
| EnsemblPlants:VIT_04s0044g01870.t01 | RefSeq:XP_002263531 | RefSeq:XP_002263531.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:+:23671051..23677144
Molecular Weight (calculated)
41143.1 Da
IEP (calculated)
9.448
GRAVY (calculated)
0.824
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVIRVLLLT ALGSFLALDR IDILGDVVRK QLNTVVFFVF NPALVYSNLA NTITLDRMVL LWFMPLNILT VCIIGSALGL LLVKTTRAPQ HLKGLILGSC
101: AAGNMGNMPL IIIPAVCREK GSPFGAPDVC HTFAMAYASL SMAIGAICLW SYVYNIVRIF SSNAREGINL HCSISEEYPH QFTLPHPLSE ENLQVVAISG
201: KMKQLLRKFS RKINLKELLA PSTTGAIVGF IIGMVPHLRK LIIGGTAPLH VVQDSASLLG DAAIPSIILI MGGNLLKGLK GSGIQLSFIV GILAVRFIFL
301: PLLGIIIVKG ALRFGLVHPD PLFQFVLLLQ YAVPPAINLG TIIQLFGAGE SECSVIMLWT YGLASVSLTL WSTLFMWLVS
101: AAGNMGNMPL IIIPAVCREK GSPFGAPDVC HTFAMAYASL SMAIGAICLW SYVYNIVRIF SSNAREGINL HCSISEEYPH QFTLPHPLSE ENLQVVAISG
201: KMKQLLRKFS RKINLKELLA PSTTGAIVGF IIGMVPHLRK LIIGGTAPLH VVQDSASLLG DAAIPSIILI MGGNLLKGLK GSGIQLSFIV GILAVRFIFL
301: PLLGIIIVKG ALRFGLVHPD PLFQFVLLLQ YAVPPAINLG TIIQLFGAGE SECSVIMLWT YGLASVSLTL WSTLFMWLVS
001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA
Arabidopsis Description
PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.