Factsheet for Bra003716.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68094	Canola	endoplasmic reticulum, plasma membrane, vacuole	100.0	100.0
CDX85953	Canola	endoplasmic reticulum, plasma membrane, vacuole	90.98	96.71
Bra015736.1-P	Field mustard	golgi, plasma membrane, vacuole	88.92	88.69
Bra008264.1-P	Field mustard	golgi, plasma membrane, vacuole	86.86	84.67
AT1G76520.2	Thale cress	plasma membrane	84.54	84.1
AT1G76530.1	Thale cress	plasma membrane	78.61	73.49
KRH38085	Soybean	extracellular	8.25	62.75
Bra025857.1-P	Field mustard	plasma membrane	61.86	59.55
PGSC0003DMT400025706	Potato	endoplasmic reticulum, plasma membrane, vacuole	56.96	54.3
TraesCS5D01G275200.1	Wheat	plasma membrane	43.04	54.05
Solyc04g082830.2.1	Tomato	plasma membrane	55.15	54.04
VIT_04s0044g01890.t01	Wine grape	endoplasmic reticulum, extracellular	18.3	53.38
KRH07852	Soybean	golgi, plasma membrane, vacuole	15.46	52.17
VIT_04s0044g01870.t01	Wine grape	plasma membrane	50.77	51.84
KRH76489	Soybean	endoplasmic reticulum, plasma membrane, vacuole	54.64	51.08
KRH28961	Soybean	golgi, plasma membrane, vacuole	54.12	50.6
KRH34529	Soybean	golgi, plasma membrane	51.29	49.75
Solyc12g095750.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	53.09	49.16
KRH39386	Soybean	golgi, plasma membrane, vacuole	51.8	48.55
GSMUA_Achr3P03690_001	Banana	plasma membrane	52.32	48.1
KRH07859	Soybean	golgi, plasma membrane, vacuole	51.29	48.07
EER99101	Sorghum	golgi, plasma membrane, vacuole	50.77	47.58
EER99100	Sorghum	golgi, plasma membrane, vacuole	50.52	47.34
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	50.0	47.2
VIT_04s0044g01860.t01	Wine grape	golgi, plasma membrane, vacuole	50.26	46.65
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	45.36	46.44
KRG92281	Soybean	plasma membrane	47.94	45.48
KXG35918	Sorghum	plasma membrane	48.45	45.41
VIT_04s0044g01850.t01	Wine grape	golgi, plasma membrane, vacuole	48.71	45.22
VIT_04s0044g01880.t01	Wine grape	plastid	52.58	44.44
TraesCS5B01G267800.2	Wheat	golgi, plasma membrane, vacuole	42.53	43.77
TraesCS5A01G267300.1	Wheat	extracellular	27.84	43.72
KRH66552	Soybean	plasma membrane	47.42	43.4
PGSC0003DMT400075596	Potato	plasma membrane	22.42	42.44
KRG92282	Soybean	plasma membrane	28.09	42.08
Bra031803.1-P	Field mustard	plasma membrane	40.21	40.62
KRH48800	Soybean	plasma membrane	43.04	39.95
Bra037268.1-P	Field mustard	golgi, plasma membrane	39.43	38.93
KRH48798	Soybean	plasma membrane	41.75	38.76
Bra002068.1-P	Field mustard	plasma membrane	38.92	38.42
KRH34530	Soybean	cytosol, endoplasmic reticulum, plasma membrane	29.9	37.06
KRG89678	Soybean	plasma membrane	19.07	37.0
KRH07851	Soybean	plasma membrane	27.84	36.36
HORVU5Hr1G073670.1	Barley	cytosol	50.0	36.19
Bra030441.1-P	Field mustard	golgi, plasma membrane, plastid	30.15	27.66
Bra014265.1-P	Field mustard	plasma membrane	29.64	26.68
Bra016159.1-P	Field mustard	golgi, plasma membrane	30.93	26.14
Bra037193.1-P	Field mustard	plasma membrane	40.21	25.57
Zm00001d024842_P002	Maize	plasma membrane	17.27	21.68

Protein Annotations

EnsemblPlants:Bra003716.1	EnsemblPlants:Bra003716.1-P	EnsemblPlantsGene:Bra003716	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF6
PFAM:PF03547	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002541558	UniProt:M4CHN3	MapMan:11.2.4.2
MapMan:24.2.5.2.2	:	:	:	:	:

Description

AT1G76520 (E=7e-184) | auxin efflux carrier family protein

Coordinates

chrA07:-:14665520..14667314

Molecular Weight (calculated)

42184.8 Da

IEP (calculated)

8.531

GRAVY (calculated)

0.635

Length

388 amino acids

Sequence
(BLAST)

001: MLKLLHLFIT SSKPVVEILL ITSVGLYMAL DGVNLLGPDA RKYLNDIVFY VFNPSLVGSR LADSVTYDSL VKMWFMPINL LLTFIIGSLL GWIVILITKP
101: PSNLRGLIVG CCAAGNLGNM PLIIIPAVCK DKGGPFGDPE NCNKYGMGYV ALSMAMGSVY IWTYVYNIMR VLSNSVIETQ PSIESNCKVP LISSREEEED
201: NHKVGRWDRF KRRMVSLSEK VNLSTIFAPT TIAAIIALVI GLINPVRELI IGNVAPLGVL QDSVTLVGDG AIPATTLIIG GNLLKGMRSS GMKRSSIVGV
301: LVARYILLPI SGVLIVRGAY KLDLITSEPL YQFVLLIQYA VPPAMSLGTI TQLFGAGESE CSVIMLWAYG LASVSLTAWP TFFMWLVA

Best Arabidopsis Sequence Match ( AT1G76520.1 )
(BLAST)

001: MVKLLELFIT SSKPVVEILL ITSVGFYMAL DGVNLLGHDA RKYLNNIVFY VFSPSLIGSR LADSVTYESL VKMWFMPVNV LLTFIIGSLL GWIVIVITKP
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA

Arabidopsis Description

PILS3Protein PIN-LIKES 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.