CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34530	Soybean	cytosol, endoplasmic reticulum, plasma membrane	68.34	56.55
KRH34529	Soybean	golgi, plasma membrane	85.33	55.25
CDY45981	Canola	golgi, plasma membrane, vacuole	31.66	53.25
KRH07852	Soybean	golgi, plasma membrane, vacuole	23.17	52.17
KRG92281	Soybean	plasma membrane	77.22	48.9
KRH56032	Soybean	extracellular, golgi, plasma membrane	18.15	38.52
KRH48800	Soybean	plasma membrane	56.37	34.93
KRH66552	Soybean	plasma membrane	55.98	34.2
KRH48798	Soybean	plasma membrane	51.35	31.82
GSMUA_Achr3P03690_001	Banana	plasma membrane	49.42	30.33
TraesCS5D01G275200.1	Wheat	plasma membrane	35.91	30.1
KRH07859	Soybean	golgi, plasma membrane, vacuole	47.49	29.71
KRH39386	Soybean	golgi, plasma membrane, vacuole	46.72	29.23
KRH28961	Soybean	golgi, plasma membrane, vacuole	45.95	28.67
CDX87589	Canola	golgi, plasma membrane, vacuole	42.86	28.53
Bra015736.1-P	Field mustard	golgi, plasma membrane, vacuole	42.47	28.28
EER99100	Sorghum	golgi, plasma membrane, vacuole	45.17	28.26
CDY20402	Canola	endoplasmic reticulum, plasma membrane, vacuole	42.08	28.17
CDX68094	Canola	endoplasmic reticulum, plasma membrane, vacuole	42.08	28.09
Bra003716.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	42.08	28.09
KRH76489	Soybean	endoplasmic reticulum, plasma membrane, vacuole	44.79	27.95
EER99101	Sorghum	golgi, plasma membrane, vacuole	44.4	27.78
Bra008264.1-P	Field mustard	golgi, plasma membrane, vacuole	42.47	27.64
KXG35918	Sorghum	plasma membrane	44.02	27.54
KRG89678	Soybean	plasma membrane	21.24	27.5
AT1G76520.2	Thale cress	plasma membrane	41.31	27.44
CDY29492	Canola	plasma membrane	40.54	27.42
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	41.31	26.03
CDX85953	Canola	endoplasmic reticulum, plasma membrane, vacuole	35.91	25.48
AT1G76530.1	Thale cress	plasma membrane	40.15	25.06
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	35.91	24.54
KRH28941	Soybean	plasma membrane	38.22	23.63
KRH39407	Soybean	endoplasmic reticulum, plasma membrane, vacuole	36.68	23.23
KRH76521	Soybean	plasma membrane	37.45	23.15
AT1G20925.1	Thale cress	plasma membrane	40.54	22.25
Bra025857.1-P	Field mustard	plasma membrane	33.98	21.84
CDY31514	Canola	mitochondrion, plasma membrane	40.15	21.76
TraesCS5B01G267800.2	Wheat	golgi, plasma membrane, vacuole	30.12	20.69
HORVU5Hr1G073670.1	Barley	cytosol	41.31	19.96
KRH00524	Soybean	plasma membrane	27.03	16.91
KRH40632	Soybean	plasma membrane	26.64	16.67
KRH38174	Soybean	plasma membrane	26.25	15.45
KRH07851	Soybean	plasma membrane	17.37	15.15
KRG94282	Soybean	plasma membrane	25.87	15.06
TraesCS5A01G267300.1	Wheat	extracellular	11.58	12.15
KRH38085	Soybean	extracellular	0.0	0.0

Protein Annotations

EMBL:ACUP02012736	EnsemblPlants:KRG92282	EnsemblPlantsGene:GLYMA_20G201700	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF6
PFAM:PF03547	ProteinID:KRG92282	ProteinID:KRG92282.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0006ED6E84
UniProt:A0A0R0EQ77	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:43860075..43864809

Molecular Weight (calculated)

27649.7 Da

IEP (calculated)

8.070

GRAVY (calculated)

0.634

Length

259 amino acids

Sequence
(BLAST)

001: MQGLMLKPLF RNLGNLPLII VPAVCKENTS PFGAVDVFDD SKVGPVSAIE TDLENHSAEP VVTAEDLSQA NDHVPKQKQI MKPLKPLVQK LNLKVLLATA
101: TIGSILGLII GVVPPFQKMF VGDDAPLGVI EDSASMLGDA SIPAITLLLG ANLLNGLKRS GMKLSLVVRI IIVRYIVLPI LGVAIVKGAI HFGIIQHDPL
201: YQFILLLQYA LPPAISISTI TQLFGAGETK CSIVMLATYV CASFSLTLWS TKAFLGLTS

Best Arabidopsis Sequence Match ( AT1G20925.1 )
(BLAST)

001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA

Arabidopsis Description

PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.